Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   0.88 
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   2.7  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   2.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   8.2  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 212 PTDYPFKPP-KVAFTTRI 262
           PTDY +KPP K+  TT++
Sbjct: 390 PTDYSYKPPAKITVTTQM 407


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 232 FERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIF 125
           F ++VC   YG+EE+   +  +N+     L  EQI+
Sbjct: 54  FGQIVCSFRYGREEDE--VMGLNFQKELCLASEQIY 87


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 232 FERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIF 125
           F ++VC   YG+EE+   +  +N+     L  EQI+
Sbjct: 54  FGQIVCSFRYGREEDE--VMGLNFQKELCLASEQIY 87


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 175 LSRRSFLPYHTFPYRLPFQ 231
           ++  + +PYH  PY  P+Q
Sbjct: 341 MASMNIVPYHMSPYGHPYQ 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,992
Number of Sequences: 2352
Number of extensions: 15821
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)