BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308A12f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 309 9e-85 S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 309 9e-85 AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 143 6e-35 U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 131 3e-31 AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 131 3e-31 AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 119 1e-27 AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 117 4e-27 U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 116 1e-26 Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 101 2e-22 U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 101 3e-22 AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 101 3e-22 AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 100 5e-22 U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 93 8e-20 AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 93 8e-20 AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 89 2e-18 U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 88 3e-18 AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 78 4e-15 AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 76 2e-14 Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 73 1e-13 U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 72 3e-13 AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 66 1e-11 U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 66 1e-11 U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 66 2e-11 Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 65 3e-11 Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 52 2e-07 Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 49 2e-06 Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 43 1e-04 U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 43 2e-04 Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 33 0.094 AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 0.87 Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 29 1.5 AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 2.0 Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical p... 29 2.7 AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 28 4.7 AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 28 4.7 Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 6.2 L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 27 6.2 L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 6.2 AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 6.2 AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 27 6.2 AL032648-8|CAI46618.1| 365|Caenorhabditis elegans Hypothetical ... 27 8.1 >Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical protein M7.1 protein. Length = 147 Score = 309 bits (758), Expect = 9e-85 Identities = 137/147 (93%), Positives = 144/147 (97%) Frame = +2 Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223 MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60 Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403 PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLLSICSLLCDPNPDDPLV Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120 Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484 PEIARIYKTDRE+YN+LAREWT+KYAM Sbjct: 121 PEIARIYKTDRERYNQLAREWTQKYAM 147 >S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conjugating enzyme protein. Length = 147 Score = 309 bits (758), Expect = 9e-85 Identities = 137/147 (93%), Positives = 144/147 (97%) Frame = +2 Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223 MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60 Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403 PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLLSICSLLCDPNPDDPLV Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120 Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484 PEIARIYKTDRE+YN+LAREWT+KYAM Sbjct: 121 PEIARIYKTDRERYNQLAREWTQKYAM 147 >AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin conjugating enzyme protein13 protein. Length = 151 Score = 143 bits (347), Expect = 6e-35 Identities = 69/143 (48%), Positives = 91/143 (63%) Frame = +2 Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232 +RI +E Q L DP SA P + ++ I GP DSP+ GGVF L + P +YP Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66 Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412 PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNP+DPL ++ Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126 Query: 413 ARIYKTDREKYNELAREWTRKYA 481 A +KT+ + + A++WT YA Sbjct: 127 AEQWKTNEAEAIKTAKQWTMNYA 149 >U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. Length = 192 Score = 131 bits (317), Expect = 3e-31 Identities = 54/137 (39%), Positives = 91/137 (66%) Frame = +2 Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232 +R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66 Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412 PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126 Query: 413 ARIYKTDREKYNELARE 463 A++Y+ +R +Y + ++ Sbjct: 127 AQLYQENRREYEKRVQQ 143 >AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin conjugating enzyme protein1 protein. Length = 192 Score = 131 bits (317), Expect = 3e-31 Identities = 54/137 (39%), Positives = 91/137 (66%) Frame = +2 Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232 +R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66 Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412 PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126 Query: 413 ARIYKTDREKYNELARE 463 A++Y+ +R +Y + ++ Sbjct: 127 AQLYQENRREYEKRVQQ 143 >AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin conjugating enzyme protein20 protein. Length = 199 Score = 119 bits (287), Expect = 1e-27 Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 1/120 (0%) Frame = +2 Query: 125 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL 301 E+L + I GP D+PY GG+F L I P YPF PP V F+T+I+HPN++S G ICL Sbjct: 34 ENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICL 93 Query: 302 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 DIL+ QW+ +LT+ VLLSI +L+C P P DP +A+ Y + A WT K+A Sbjct: 94 DILKDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153 >AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical protein Y87G2A.9 protein. Length = 170 Score = 117 bits (282), Expect = 4e-27 Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 14/157 (8%) Frame = +2 Query: 47 ALKRINRELQDLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223 ALKR+ E ++L PP A P ED F W+ I GP ++ + GVF I FP DY Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64 Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLSIC 364 P PPK+ FT I+HPNI ++G +C+ IL A +WSP +I K+LLS+ Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVV 124 Query: 365 SLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 475 S+L +PN + P A++++ DR ++ ++A RK Sbjct: 125 SMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161 >U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conjugating enzyme protein18 protein. Length = 153 Score = 116 bits (279), Expect = 1e-26 Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = +2 Query: 47 ALKRINRELQDLGR-DPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223 A +R+ +EL DL A + +L W ++ P PY G F + I FP DY Sbjct: 3 ATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDY 61 Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLLSICSLLCDPNPDDPL 400 PFKPPKVAF T+IYHPN++ G CL I+ A+ W PA +V++++ SL+ +P P P+ Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPI 121 Query: 401 VPEIARIYKTDREKYNELAREWTRKYA 481 ++A ++ D +K+ + A E TRK+A Sbjct: 122 RADVAEEFQKDHKKFMKTAEEHTRKHA 148 >Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical protein F58A4.10 protein. Length = 164 Score = 101 bits (243), Expect = 2e-22 Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 14/149 (9%) Frame = +2 Query: 59 INRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 235 + ++L D+ R P SAG D++ W+ ++GP D+ Y+GG F + FP DYP KP Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67 Query: 236 PKVAFTTRIYHPNINSNGSICLDIL-------------RAQWSPALTISKVLLSICSLLC 376 PK+ F + I+HPNI+ G++C+ IL +W P T+ +LLS+ S+L Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127 Query: 377 DPNPDDPLVPEIARIYKTDREKYNELARE 463 DPN + P + A K RE Y E ++ Sbjct: 128 DPNFESPANVDAA---KMQRENYAEFKKK 153 >U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conjugating enzyme protein21 protein. Length = 229 Score = 101 bits (242), Expect = 3e-22 Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 20/168 (11%) Frame = +2 Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGE----DLFHWQATIMGPVDSPYQGGVFFLTI 205 S +AL R+ R+ +++ AG H E +L + I GP +PY GG F + + Sbjct: 16 SNLALARVTRKCKEVANASDIT-EAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74 Query: 206 HFPTDYPFKPPKVA---------------FTTRIYHPNINSN-GSICLDILRAQWSPALT 337 P YPF+PPKV F TRI+HPNI+S G+ICLDIL+ +W+ +LT Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134 Query: 338 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 + VLLS+ ++LC P P DP +A+ + + + A WT +A Sbjct: 135 LRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182 >AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical protein F52C6.12 protein. Length = 78 Score = 101 bits (242), Expect = 3e-22 Identities = 43/54 (79%), Positives = 48/54 (88%) Frame = +2 Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTI 205 MALKRI +EL DLGRDPPAQCS G G+DL+HWQATIMGP +SPYQGG+FFLTI Sbjct: 1 MALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54 >AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin conjugating enzyme protein3 protein. Length = 243 Score = 100 bits (240), Expect = 5e-22 Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 13/147 (8%) Frame = +2 Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217 S AL+ + EL++L P + + ++LF W I GP + YQGG F +I FP+ Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67 Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLS 358 +YP+ PP + FTT+++HPN+ NG +C+ IL + +W+P ++ +LLS Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLS 127 Query: 359 ICSLLCDPNPDDPLVPEIARIYKTDRE 439 + SLL +PN P + + +Y+ +E Sbjct: 128 VISLLNEPNTSSPANVDASVMYRKWKE 154 >U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conjugating enzyme protein9 protein. Length = 166 Score = 93.5 bits (222), Expect = 8e-20 Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 2/120 (1%) Frame = +2 Query: 128 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 307 +LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL + Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96 Query: 308 L--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 L W P+++I ++L+ I LL PN +DP E +IY +R +Y + ++ KYA Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156 >AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-conjugating enzyme 9homolog protein. Length = 166 Score = 93.5 bits (222), Expect = 8e-20 Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 2/120 (1%) Frame = +2 Query: 128 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 307 +LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL + Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96 Query: 308 L--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 L W P+++I ++L+ I LL PN +DP E +IY +R +Y + ++ KYA Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156 >AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin conjugating enzyme protein8 protein. Length = 221 Score = 88.6 bits (210), Expect = 2e-18 Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 2/110 (1%) Frame = +2 Query: 158 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPAL 334 GP D+ Y+ GV+ + + P YPFK P + F +I+HPNI+ ++G++CLD++ W+ Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100 Query: 335 TISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 ++ + + LL PN DPL E AR+Y E+Y RE+ ++A Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFA 150 >U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conjugating enzyme protein23 protein. Length = 546 Score = 88.2 bits (209), Expect = 3e-18 Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 2/115 (1%) Frame = +2 Query: 143 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRA 316 Q I G ++PY+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+ Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441 Query: 317 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481 W ++TI KVL+ I S + + N +P+ EI +RE + + A WT+++A Sbjct: 442 VWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496 >AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical protein Y54E5B.4 protein. Length = 152 Score = 77.8 bits (183), Expect = 4e-15 Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Frame = +2 Query: 38 SQMALKRINRELQDLGRDPPAQCSAG--PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHF 211 S A +R+ +EL L + P DL W+ ++G + Y G VF L F Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61 Query: 212 PTDYPFKPPKVAFT--TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 373 YPF P+V F T HP+I SNG ICL IL W+PAL++ V LSI S+L Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSML 117 >AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin conjugating enzyme protein26 protein. Length = 203 Score = 75.8 bits (178), Expect = 2e-14 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 3/120 (2%) Frame = +2 Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217 S +AL+R+ ++ Q L ++P A P ++ W+ I+G +PY+GG++ + FP Sbjct: 6 STVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPK 65 Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ---WSPALTISKVLLSICSLLCDPNP 388 D+PFKPP + T + +N +CL I W+PA T+S ++ + S + D P Sbjct: 66 DFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQP 123 >Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical protein R09B3.4 protein. Length = 180 Score = 72.9 bits (171), Expect = 1e-13 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 7/113 (6%) Frame = +2 Query: 161 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ------W 322 P + Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR W Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126 Query: 323 SPALTISKVLLSICSLLCD-PNPDDPLVPEIARIYKTDREKYNELAREWTRKY 478 P ++ V+ + SL D + +D L + A+++ +RE +N RE+ +Y Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179 >U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (conjugating enzyme)variant protein 2 protein. Length = 230 Score = 71.7 bits (168), Expect = 3e-13 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Frame = +2 Query: 122 GEDLF-HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 298 G D++ W T+ GP SP++GG + ++++F +P PP F T ++HPN++ GSI Sbjct: 64 GADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIY 122 Query: 299 LDILRAQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR--EWT 469 L +L + WS ++ K+L I +LL P+ E Y+ RE Y AR WT Sbjct: 123 LKMLEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWT 182 >AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin conjugating enzyme protein15 protein. Length = 218 Score = 66.5 bits (155), Expect = 1e-11 Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 6/149 (4%) Frame = +2 Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217 S A++R+ ++ L +DP A P+ +++ W + G D+P+ GG ++ + F Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76 Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 388 ++P+ PP + T + +N +CL D W+P T+S +L+ + S + + +P Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFMNENSP 134 Query: 389 DDPLV---PEIARIYKTDREKYNELAREW 466 + P+ R+Y +++N W Sbjct: 135 AAGSIAGTPQDQRMYAAASKEFNVKVYNW 163 >U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conjugating enzyme protein17 protein. Length = 679 Score = 66.1 bits (154), Expect = 1e-11 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 12/82 (14%) Frame = +2 Query: 152 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL-- 310 I GP D+PY G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508 Query: 311 -----RAQWSPALTISKVLLSI 361 +W+P ++ +VL+SI Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSI 530 >U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conjugating enzyme protein6 protein. Length = 314 Score = 65.7 bits (153), Expect = 2e-11 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 187 + QYN+ ++R+ +E +L R P A P ++LF W TI G + + ++GG Sbjct: 1 MSEQYNT---KNAGVRRLMKEAMEL-RQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGG 56 Query: 188 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL---RAQWSPALTISKVLLS 358 ++ I FP DYP KPP + T + N +CL I W P+ +I LL+ Sbjct: 57 IYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSISGYHPETWLPSWSIRTALLA 114 Query: 359 ICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 475 + L P+ + + K +R++ +L+ EW K Sbjct: 115 LIGFL--PSTPGGALGSLDYPPK-ERQRLAKLSCEWKCK 150 >Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical protein F49E12.4 protein. Length = 160 Score = 64.9 bits (151), Expect = 3e-11 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%) Frame = +2 Query: 50 LKRINRELQDLGRDPPAQCSAGPHGE---DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 220 L RI +E+ DL ++ E D+F ++ G + Y+ +F LT+ + Sbjct: 15 LSRIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVL---YKNMIFTLTLDVNVE 71 Query: 221 YPFKPPKVAFTTRIYHPNINS-NGSICLD-ILRAQWSPALTISKVLLSICSLLCDPNPDD 394 YPFKPP + F +YHPN++ +C +L+ W P T+ VLL++ LL +P+ Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSR 131 Query: 395 PLVPEIARIYKTDR----EKYNELAREW 466 P+ + A Y ++ +K ELA++W Sbjct: 132 PVNIDAAHDYIHNKVEFVKKSTELAKKW 159 >Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical protein F39B2.2 protein. Length = 139 Score = 52.4 bits (120), Expect = 2e-07 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Frame = +2 Query: 131 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---C 298 L W A+I+GP +PY+ ++ L I +YP +PP V FTT+++ +N SNG I Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97 Query: 299 LDILRAQWSPALTISKVLLSI 361 L LR WS + I VL I Sbjct: 98 LTTLR-NWSNSYMIKTVLEDI 117 >Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical protein F26H9.7 protein. Length = 219 Score = 48.8 bits (111), Expect = 2e-06 Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 11/128 (8%) Frame = +2 Query: 131 LFHWQATIMGPVDSPYQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 307 LFH I GPV S Y+GG FF I+ P P+V F T I+HPN+ G+ D+ Sbjct: 63 LFH--VIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN--WDM 118 Query: 308 LRAQWSPALTISKVLLSICSLLCDPNPD----------DPLVPEIARIYKTDREKYNELA 457 QW + + I + + D D P I+R+ K D K+ A Sbjct: 119 RGIQWERRSNLEVLYNFIVEGMRNVKYDIERRNLAQLEDMSQPNISRLAKEDWPKFERTA 178 Query: 458 REWTRKYA 481 RE+ K A Sbjct: 179 REFVMKMA 186 >Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical protein Y69H2.6 protein. Length = 292 Score = 43.2 bits (97), Expect = 1e-04 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 8/140 (5%) Frame = +2 Query: 68 ELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP--PK 241 E ++ R P P + F W I + GG+F IH P ++P P+ Sbjct: 27 EFVEVCRAPIDGIFVSPSANNKFLWFGVIFVR-KGIFGGGIFRFNIHIPLEFPDASDLPR 85 Query: 242 VAFT-TRIYHPNI-NSNGSICLDILRAQ-WSP---ALTISKVLLSICSLLCDPNPDDPLV 403 V F + ++HP I + +CL+ + W +L V+L D + D + Sbjct: 86 VIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHSLRRVLVVLQRSFYSYDVDTDKCIN 145 Query: 404 PEIARIYKTDREKYNELARE 463 PE + +YK R+K+ E+A+E Sbjct: 146 PEASVLYKEHRDKFREIAKE 165 >U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conjugating enzyme protein22 protein. Length = 182 Score = 42.7 bits (96), Expect = 2e-04 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = +2 Query: 152 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 304 I GP D+PY+ GVF + + FP +YP P++ F T I++ + S G + ++ Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86 >Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical protein C17D12.5 protein. Length = 139 Score = 33.5 bits (73), Expect = 0.094 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +2 Query: 191 FFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSL 370 + +T+ P +PF PP + T + N L + QW P+ I VL+ CS+ Sbjct: 51 YIVTVAIPPKFPFSPPAITCKT-------DKNMKF-LFLEENQWKPSTGIVAVLIEACSV 102 Query: 371 LC--DPNPDDPLVPEI 412 + D P P++P I Sbjct: 103 ISRRDLVPRAPVLPRI 118 >AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone receptor familyprotein 166 protein. Length = 363 Score = 30.3 bits (65), Expect = 0.87 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +2 Query: 194 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSIC 364 F I+ P P + ++ +I + +++ + D LR QW P ++ KVL+ C Sbjct: 300 FCLINNPRSAPSRLLEIISINQILNRQFHASYKL-FDALRKQWDPTMSFQKVLVESC 355 >Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical protein C04F12.8 protein. Length = 272 Score = 29.5 bits (63), Expect = 1.5 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 245 AFTTRIYHPNINSNGSICLDILRAQWSP-ALTISKVLLSICSLLCDPNPDDPLVPEIARI 421 AF+ Y P+++S S+ LR +SP +L S + L+ L P P + + Sbjct: 200 AFSASTYRPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFSPAPTRKPRQSLFSM 259 Query: 422 YKT 430 Y T Sbjct: 260 YST 262 >AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical protein T12B5.3 protein. Length = 304 Score = 29.1 bits (62), Expect = 2.0 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -2 Query: 232 FERVVCREMYGKEENSSLIRTVNWA--HNCGLPMEQIF 125 FER+ C E + +N+ T W HNC +P+EQ+F Sbjct: 185 FERLACLEQW---KNAKTFETP-WVLVHNCQIPIEQLF 218 >Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical protein F10A3.6 protein. Length = 337 Score = 28.7 bits (61), Expect = 2.7 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +2 Query: 332 LTISKVLLSICSLLCDPNP--DDPLVPEIARIYKTDREKYNELAREW 466 ++IS + S+C + P+P D+ +PE + Y + E+YN L ++ Sbjct: 140 ISISFLWFSMCYFVNGPSPMKDENFLPEFQKNYCMEPEEYNYLGPQY 186 >AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoformb protein. Length = 1420 Score = 27.9 bits (59), Expect = 4.7 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 308 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 436 L +WS A+ +K + S LLC D + L+ E+ +Y D+ Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650 >AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoforma protein. Length = 1418 Score = 27.9 bits (59), Expect = 4.7 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 308 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 436 L +WS A+ +K + S LLC D + L+ E+ +Y D+ Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650 >Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical protein M04B2.1 protein. Length = 870 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 335 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 451 TIS +C LL + +P+ PL I R++ +R K ++ Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341 >Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein F46C3.3 protein. Length = 2557 Score = 27.5 bits (58), Expect = 6.2 Identities = 16/67 (23%), Positives = 32/67 (47%) Frame = +3 Query: 183 EEFSSLPYISLQTTLSNHQKLHSQHVFIILT*TVMVPSVLTFCVHSGHQRSPYPKCCSQS 362 EE++ + + T Q Q+V +++T ++M PS++T + G Q + P+ Sbjct: 1202 EEYTPMNFAPPPTFTYPQQMPMMQYVPVMMTSSMMTPSMMTPSMMPGQQIAMVPQQMMMQ 1261 Query: 363 AXFYAIP 383 F +P Sbjct: 1262 PHFSYVP 1268 >L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient receptor potential)channel family protein 1, isoform b protein. Length = 1047 Score = 27.5 bits (58), Expect = 6.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +1 Query: 319 VVTSAHHIQSVALNLLXSMRSQPRRPFG 402 +V S+ HI +V +++ +M + RRP+G Sbjct: 834 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 861 >L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient receptor potential)channel family protein 1, isoform a protein. Length = 1027 Score = 27.5 bits (58), Expect = 6.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +1 Query: 319 VVTSAHHIQSVALNLLXSMRSQPRRPFG 402 +V S+ HI +V +++ +M + RRP+G Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841 >AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous cation channel proteinprotein. Length = 1027 Score = 27.5 bits (58), Expect = 6.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +1 Query: 319 VVTSAHHIQSVALNLLXSMRSQPRRPFG 402 +V S+ HI +V +++ +M + RRP+G Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841 >AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc finger protein protein. Length = 870 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 335 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 451 TIS +C LL + +P+ PL I R++ +R K ++ Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341 >AL032648-8|CAI46618.1| 365|Caenorhabditis elegans Hypothetical protein Y54G9A.10 protein. Length = 365 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 104 IVLVDPCPDLVIPY*FFLTPFDYFML 27 IVLVD +LV+ Y FFL F +F + Sbjct: 178 IVLVDQMFNLVVAYLFFLFYFSFFYM 203 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,778,735 Number of Sequences: 27780 Number of extensions: 327930 Number of successful extensions: 941 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 920 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -