Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A12f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 266 6e-72
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 266 6e-72
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 263 4e-71
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 263 4e-71
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 262 8e-71
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 262 8e-71
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 262 8e-71
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 261 2e-70
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 261 2e-70
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 261 2e-70
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 258 2e-69
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 256 9e-69
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 237 4e-63
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 194 2e-50
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 186 1e-47
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 163 5e-41
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 157 6e-39
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 153 5e-38
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 153 5e-38
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 153 7e-38
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 152 1e-37
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 150 6e-37
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 145 1e-35
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 137 4e-33
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 130 4e-31
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 124 4e-29
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 120 6e-28
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 115 2e-26
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 114 3e-26
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 108 2e-24
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 106 8e-24
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 105 2e-23
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 104 4e-23
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 104 4e-23
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 103 1e-22
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 102 1e-22
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 95 3e-20
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 88 4e-18
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 78 3e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 78 3e-15
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 78 4e-15
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 73 1e-13
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 73 1e-13
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 58 3e-09
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 56 1e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 1e-08
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 50 1e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 46 2e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 45 3e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 45 4e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 45 4e-05
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 41 6e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 40 8e-04
At3g56890.1 68416.m06328 F-box family protein-related predicted ... 31 0.62
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 30 1.1
At3g17180.1 68416.m02191 serine carboxypeptidase S10 family prot... 29 2.5
At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical ... 29 2.5
At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase / x... 28 4.4
At5g10830.1 68418.m01258 embryo-abundant protein-related similar... 27 5.8
At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family pr... 27 7.7
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 266 bits (652), Expect = 6e-72
Identities = 116/147 (78%), Positives = 128/147 (87%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T++YHPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA IYKTDR KY A+ WT+KYAM
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAM 147
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 266 bits (652), Expect = 6e-72
Identities = 116/147 (78%), Positives = 128/147 (87%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T++YHPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA IYKTDR KY A+ WT+KYAM
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAM 147
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 263 bits (645), Expect = 4e-71
Identities = 115/148 (77%), Positives = 128/148 (86%)
Frame = +2
Query: 41 QMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 220
+MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP D
Sbjct: 30 EMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89
Query: 221 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 400
YPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPL
Sbjct: 90 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 149
Query: 401 VPEIARIYKTDREKYNELAREWTRKYAM 484
VPEIA +YKTD+ KY AR WT+KYAM
Sbjct: 150 VPEIAHMYKTDKNKYESTARTWTQKYAM 177
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 263 bits (645), Expect = 4e-71
Identities = 115/147 (78%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTDR KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAM 147
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 262 bits (643), Expect = 8e-71
Identities = 115/147 (78%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTDR KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAM 147
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 262 bits (643), Expect = 8e-71
Identities = 115/147 (78%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTDR KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAM 147
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 262 bits (643), Expect = 8e-71
Identities = 115/147 (78%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTD+ KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAM 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 261 bits (640), Expect = 2e-70
Identities = 114/147 (77%), Positives = 128/147 (87%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP+ CSAGP ED+FHWQATIMGP +SPY GGVF ++IHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKV+F T++YHPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTDR KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAM 147
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 261 bits (639), Expect = 2e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTD+ KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAM 147
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 261 bits (639), Expect = 2e-70
Identities = 114/147 (77%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA +YKTD+ KY AR WT+KYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAM 147
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 258 bits (631), Expect = 2e-69
Identities = 111/147 (75%), Positives = 127/147 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA +RI +EL++L RDPP CSAGP GED+FHWQATIMGP +SPY GGVF + IHFP DY
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 403
PFKPPKV F T+++HPNINSNG+ICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLV
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 404 PEIARIYKTDREKYNELAREWTRKYAM 484
PEIA IYKTD+ KY +AR WT+KYA+
Sbjct: 121 PEIAHIYKTDKTKYEAMARSWTQKYAL 147
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 256 bits (626), Expect = 9e-69
Identities = 114/148 (77%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCS-AGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 220
MA KRI +EL+DL +DPP C AGP ED+FHWQATIMGP +SPY GGVF +TIHFP D
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 221 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 400
YPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPL
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 401 VPEIARIYKTDREKYNELAREWTRKYAM 484
VPEIA +YKTDR KY AR WT+KYAM
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAM 148
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 237 bits (579), Expect = 4e-63
Identities = 106/148 (71%), Positives = 123/148 (83%), Gaps = 1/148 (0%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 220
MA KRI+REL+D+ R PPA CSAGP E D+FHWQATIMGP DSPY GGVF ++I F +D
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 221 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 400
YPFKPPKV F T++YHPNI+S GSICLDIL+ QWSPA T SKVLLSICSLL DPNP+DPL
Sbjct: 61 YPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 401 VPEIARIYKTDREKYNELAREWTRKYAM 484
VPEIA +YK D+ KY A++WT+KYAM
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYAM 148
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 194 bits (474), Expect = 2e-50
Identities = 83/143 (58%), Positives = 111/143 (77%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
KRI RE+ +L DPP CSAGP G++L+HW ATI+GP +PY+GG+FFL I FP+DYPFK
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412
PPK+ F TRIYH N+++ G + ++ILR WSPALTI+KVL +I S+ P P P +P I
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVI 158
Query: 413 ARIYKTDREKYNELAREWTRKYA 481
AR+Y TDREK++E+A+EWT ++A
Sbjct: 159 ARLYLTDREKHDEVAKEWTLRFA 181
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 186 bits (452), Expect = 1e-47
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 44 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLL 355
PFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKV L
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTL 104
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 163 bits (397), Expect = 5e-41
Identities = 70/125 (56%), Positives = 95/125 (76%)
Frame = +2
Query: 107 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 286
S G + +++ W A I GP +PY+GG+F L+I FPTDYPFKPPK F T IYHPNIN
Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDE 87
Query: 287 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 466
GSIC++IL+ +W+PAL + KVLLSI LL PNPDDPLVPEI +++K +R ++++ ARE+
Sbjct: 88 GSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREF 147
Query: 467 TRKYA 481
T ++A
Sbjct: 148 TARHA 152
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 157 bits (380), Expect = 6e-39
Identities = 68/134 (50%), Positives = 90/134 (67%)
Frame = +2
Query: 47 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 226
A KR+ + + L +DPP S P ++ HW A I GP D+P+ GG F LT+HF DYP
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYP 64
Query: 227 FKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 406
KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ VL SI SLLCDPNPD P
Sbjct: 65 NKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANA 124
Query: 407 EIARIYKTDREKYN 448
E AR++ ++ +YN
Sbjct: 125 EAARLFSENKREYN 138
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 153 bits (372), Expect = 5e-38
Identities = 68/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 397
DYP KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 398 LVPEIARIYKTDREKYNELARE 463
E AR+Y + +YN R+
Sbjct: 122 ANSEAARMYSESKREYNRRVRD 143
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 153 bits (372), Expect = 5e-38
Identities = 68/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 397
DYP KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 398 LVPEIARIYKTDREKYNELARE 463
E AR+Y + +YN R+
Sbjct: 122 ANSEAARMYSESKREYNRRVRD 143
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 153 bits (371), Expect = 7e-38
Identities = 68/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 397
DYP KPP V F +R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 398 LVPEIARIYKTDREKYNELARE 463
E AR++ + +YN RE
Sbjct: 122 ANSEAARMFSESKREYNRRVRE 143
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 152 bits (369), Expect = 1e-37
Identities = 73/143 (51%), Positives = 95/143 (66%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
+RI +E Q L +P SA P E++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 413 ARIYKTDREKYNELAREWTRKYA 481
A+ +K++ + E A+EWTR YA
Sbjct: 128 AKHWKSNEAEAVETAKEWTRLYA 150
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 150 bits (363), Expect = 6e-37
Identities = 71/143 (49%), Positives = 95/143 (66%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 412
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 413 ARIYKTDREKYNELAREWTRKYA 481
A+ +K++ + + A+EWTR YA
Sbjct: 128 AKHWKSNEAEAVDTAKEWTRLYA 150
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 145 bits (352), Expect = 1e-35
Identities = 65/124 (52%), Positives = 91/124 (73%), Gaps = 2/124 (1%)
Frame = +2
Query: 116 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 295
P E++F W+AT+ GPV PY+ GVF +++H P YP++PPK+ F T+I+HPNI+ G I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 296 CLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV--PEIARIYKTDREKYNELAREWT 469
+DIL ++WS ALTI+ VLLSICS+L NP +PL+ AR+Y+ DR+ Y ++AREWT
Sbjct: 114 FVDILGSRWSSALTINLVLLSICSIL--SNPVEPLLVSNHAARLYQKDRKAYEKVAREWT 171
Query: 470 RKYA 481
KYA
Sbjct: 172 LKYA 175
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 137 bits (332), Expect = 4e-33
Identities = 63/115 (54%), Positives = 80/115 (69%)
Frame = +2
Query: 137 HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA 316
++ I+GP SPY+GGVF L + P +YP PKV F T+IYHPNI+ G ICLDIL+
Sbjct: 3 YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKD 62
Query: 317 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481
+WSPAL I VLLSI +LL PNPDDPL IA+ +K++ + E A+EWTR YA
Sbjct: 63 KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 130 bits (315), Expect = 4e-31
Identities = 63/144 (43%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Frame = +2
Query: 56 RINRELQDLGRDPPAQ-CSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
RI +ELQD R+ + P ++L TI GP+ +PY+GG F + I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 233 PPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 409
PPK+ F+T+++HPNI+S +G+ICLDIL+ QWSPALT+ L+SI +LL P P DP
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 410 IARIYKTDREKYNELAREWTRKYA 481
+A Y + + + AR WT +A
Sbjct: 126 VAEQYMKNYQVFVSTARYWTETFA 149
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 124 bits (299), Expect = 4e-29
Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 13/155 (8%)
Frame = +2
Query: 56 RINRELQDLGRDPP-----AQCSAGPHGEDLFHWQATI----MGPVDSPYQGGVFFLTIH 208
R+ +EL+ L DPP S+ +G F +TI GP D+ Y G+F L I
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 209 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RAQWSPALTISKVLLSICSLLC 376
P YPF+PP V+F T IYHPNI+++G ICLDIL + W P+L IS VL S+ LL
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 377 DPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481
+PNPDD L+ E++R YK +R+ ++ ARE T KYA
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 120 bits (289), Expect = 6e-28
Identities = 59/145 (40%), Positives = 91/145 (62%)
Frame = +2
Query: 29 T*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIH 208
T +SQ LKR+ EL L SA P +++F W+ TI G D+ ++G + L++
Sbjct: 30 TVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLS 89
Query: 209 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNP 388
F DYPFKPPKV F T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 90 FSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNI 149
Query: 389 DDPLVPEIARIYKTDREKYNELARE 463
PL + A+++ +++E+Y ++ +
Sbjct: 150 SSPLNTQAAQLW-SNQEEYRKMVEK 173
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 115 bits (276), Expect = 2e-26
Identities = 57/145 (39%), Positives = 89/145 (61%)
Frame = +2
Query: 29 T*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIH 208
T +S LKR+ EL L SA P +++F W+ TI G D+ ++G + L++
Sbjct: 31 TVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLT 90
Query: 209 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNP 388
F DYPFK PKV F T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 91 FSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNI 150
Query: 389 DDPLVPEIARIYKTDREKYNELARE 463
PL + A+++ +++E+Y ++ +
Sbjct: 151 SSPLNNQAAQLW-SNQEEYRKMVEK 174
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 114 bits (275), Expect = 3e-26
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Frame = +2
Query: 41 QMALKRINRELQDLGRDPPAQCSAGPHGED--LFHWQATIMGPVDSPYQGGVFFLTIHFP 214
Q + R+ +E +++ R+ A +D +F W A I GP ++PY+GGVF L P
Sbjct: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 215 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 391
YP +PP+V F T+I+HPN++ G ICLDIL+ WSPA T+ V +I +L+ P PD
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
Query: 392 DPLVPEIARIYKT-DREKYNELAREWTRKYAM 484
PL + + ++ D +N +A+ +TR AM
Sbjct: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 108 bits (260), Expect = 2e-24
Identities = 51/105 (48%), Positives = 67/105 (63%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 233 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICS 367
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLL S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 106 bits (255), Expect = 8e-24
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 14/161 (8%)
Frame = +2
Query: 35 NSQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHF 211
NSQ L + ++L+DL + P SAG E ++F W TI+GP D+ Y+GG F+ + F
Sbjct: 2 NSQACLL-LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSF 60
Query: 212 PTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVL 352
P +YP PP V FT+ I+HPN+ +G +C+ IL +W+P T+ ++
Sbjct: 61 PQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 120
Query: 353 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 475
LSI S+L PN + P E A+ ++ R+++ + RK
Sbjct: 121 LSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRK 161
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 105 bits (252), Expect = 2e-23
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +2
Query: 125 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICL 301
+DL + T GP DS YQGGV+ + + P YP+K P V F +IYHPN++ S+G++CL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 302 DILRAQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 478
D++ WSP + V S + LL PNP DP E A + DR Y +E+ KY
Sbjct: 87 DVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKY 146
Query: 479 A 481
A
Sbjct: 147 A 147
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 104 bits (249), Expect = 4e-23
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +2
Query: 158 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 334
GP DS YQGGV+ + + P YP+K P V F T+IYHPN++ +GS+CLD++ WSP
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
Query: 335 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481
+ V + + LL PNP DPL E A + DR Y + +E+ KYA
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 104 bits (249), Expect = 4e-23
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 14/161 (8%)
Frame = +2
Query: 35 NSQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHF 211
N+Q +L + ++L+DL + P SAG E ++F W +IMGP D+ Y+GG F + F
Sbjct: 3 NNQASLL-LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSF 61
Query: 212 PTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVL 352
P +YP PP V FT+ ++HPN+ S+G +C+ IL +W+P T+ ++
Sbjct: 62 PENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIV 121
Query: 353 LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 475
LSI S+L PN + P E A+ ++ +R ++ + R+
Sbjct: 122 LSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRR 162
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 103 bits (246), Expect = 1e-22
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +2
Query: 158 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 334
GP DS Y+GGV+ + + P YP+K P V F T+IYHPN++ +GS+CLD++ WSP
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
Query: 335 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 481
+ V + + LL PNP DPL E A + DR Y + +E+ KYA
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 102 bits (245), Expect = 1e-22
Identities = 49/144 (34%), Positives = 81/144 (56%)
Frame = +2
Query: 50 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 229
+K++ +EL+ L PP + ED A I GPV +PY+ G+F + + D+P
Sbjct: 12 IKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPH 71
Query: 230 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 409
PPK F T+I+HPN+ SNG IC++ L+ W+P+L + VL + LL +P P+ L +
Sbjct: 72 SPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQ 131
Query: 410 IARIYKTDREKYNELAREWTRKYA 481
++ + ++Y AR +T +A
Sbjct: 132 AGKMLLENYDEYARHARLYTGIHA 155
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 98.7 bits (235), Expect = 2e-21
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPH-GED----LFHWQATIMGPVDSPYQGGVFFLT 202
S +A R+ E + ++ P A P G+D L W TI G + ++GG F LT
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 203 IHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ--WSPALTISKVLLSICSLLC 376
+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLD 122
Query: 377 DPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 478
PNP DP + ++ D +Y + + +++Y
Sbjct: 123 TPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 95.1 bits (226), Expect = 3e-20
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Frame = +2
Query: 128 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 307
++F W TI+GP D+ Y+GG F + FP +YP PP V FT+ ++HPN+ S+G +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 308 LR-------------AQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYN 448
L +W+P T+ ++LSI S+L PN + P E A+ ++ R+++
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 449 ELAREWTRK 475
+ RK
Sbjct: 185 KKVSRCVRK 193
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 87.8 bits (208), Expect = 4e-18
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 56 RINRELQDLGRDPPAQCSAG-PHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 229
R+++++ +L P C P+G+ DL +++ TI P + Y G F + YP
Sbjct: 35 RLHKDISELNL--PKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPH 91
Query: 230 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 409
+ PKV T++YHPNI+ G++CL+ILR W P L I+ V+ + L +PN +DPL E
Sbjct: 92 EAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHE 151
Query: 410 IARIYKTDREKY 445
A + + + + +
Sbjct: 152 AAAVLRDNPKTF 163
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 78.2 bits (184), Expect = 3e-15
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQ 71
Query: 218 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 373
YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L
Sbjct: 72 HYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 124
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 78.2 bits (184), Expect = 3e-15
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLYANETYQLQVEFPE 71
Query: 218 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 373
YP + P+V F + HP+I SNG ICLDIL WSPA+T++ V +SI S+L
Sbjct: 72 HYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSML 124
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 77.8 bits (183), Expect = 4e-15
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S++A R+ +EL + +PP ++L W ++G + Y + L + FP
Sbjct: 13 SKIATNRLQKELVEWQMNPPTGFKHKVT-DNLQRWIIEVIGAPGTLYANDTYQLQVDFPE 71
Query: 218 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 373
YP + P+V F HP+I SNG ICLDIL WSPA+T+S + +SI S+L
Sbjct: 72 HYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
+++A R+ +E + +PP+ ++L W + G + Y + L + FP
Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHRV-SDNLQRWIIEVHGVPGTLYANETYQLQVEFPE 71
Query: 218 DYPFKPPKVAFTTRI-YHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 373
YP + P+V F HP+I SNG ICLD+L WSPA+ +S + LSI S+L
Sbjct: 72 HYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 72.9 bits (171), Expect = 1e-13
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Frame = +2
Query: 5 LVESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQG 184
+ + +YN A+KRI +E++++ +P + P E++F WQ I GP D+ ++G
Sbjct: 1 MADERYN---RKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEG 57
Query: 185 GVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---AQWSPALTISKVLL 355
G++ I P DYPFKPP T + +N ICL I W P+ ++ L+
Sbjct: 58 GIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALV 115
Query: 356 SICSLL-CDPN 385
++ + + PN
Sbjct: 116 ALIAFMPTSPN 126
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +2
Query: 50 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 229
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 230 KPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 388
KPP + TT + + ICL D W+P ++S +L + S + D +P
Sbjct: 67 KPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +2
Query: 50 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 229
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 230 KPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 388
KPP + TT + + ICL D W+P ++S +L + S + D +P
Sbjct: 67 KPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 58.4 bits (135), Expect = 3e-09
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
KRI E + L +D P + + +A I+G +PY G+FF I FP YP
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 233 PPKVAFTT---RIYHPNINSNGSICLDIL-------RAQWSP-ALTISKVLLSICSLLCD 379
PP V + + RI +PN+ + G +CL +L R +W P T+ +VL+SI L+ +
Sbjct: 395 PPIVHYHSGGLRI-NPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 380 PNP 388
P
Sbjct: 454 QKP 456
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 232
K+++++ + L + P + + + +A I+G +PYQ G+FF H P+DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 233 PPKVAFTTRIY--HPNINSNGSICLDILRA-------QWSP-ALTISKVLLSICSLLCDP 382
PP + + + +PN+ G +CL +L W P + +I +VL+S+ L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 383 NP 388
P
Sbjct: 973 KP 974
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 56.0 bits (129), Expect = 1e-08
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Frame = +2
Query: 35 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 214
+S+ +K++ + + L D P S + +A I+G +PY G+FF I FP
Sbjct: 268 HSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFP 327
Query: 215 TDYPFKPPKVAFTT---RIYHPNINSNGSICLDIL-------RAQWSP-ALTISKVLLSI 361
YP PP V + + RI +PN+ + G +CL +L R +W P T+ ++L+SI
Sbjct: 328 DTYPSVPPNVHYHSGGLRI-NPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSI 386
Query: 362 CSLLCDPNP 388
+L+ + P
Sbjct: 387 QALILNEKP 395
Score = 54.4 bits (125), Expect = 4e-08
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Frame = +2
Query: 143 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT---RIYHPNINSNGSICLDIL- 310
+A I+G +PY G+FF I FP YP PPKV + + RI +PN+ G +CL ++
Sbjct: 638 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRI-NPNLYKCGKVCLSLIS 696
Query: 311 ------RAQWSP-ALTISKVLLSICSLLCDPNP 388
R +W P T+ ++L+SI +L+ + P
Sbjct: 697 TWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 143 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT---RIYHPNINSNGSICLDI 307
+A I+G +PY G+FF I FP YP PP V + + RI +PN+ + G + + I
Sbjct: 950 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRI-NPNLYNCGKVLVSI 1006
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 50 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 229
+K++ +E +L + P E + +A ++G +PY G+FF I P YP
Sbjct: 664 VKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPH 723
Query: 230 KPPKVAFTT--RIYHPNINSNGSICLDILRAQWS 325
+PP V + + +PN+ +G +CL +L WS
Sbjct: 724 EPPMVHYHSGGMRLNPNLYESGRVCLSLLNT-WS 756
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 140 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI---CLDIL 310
W TI+GP ++ Y+G +F L + +YP PP V F TRI +N + L +
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPM 106
Query: 311 RAQWSPALTISKVLLSI 361
W T+ +L+ +
Sbjct: 107 LTNWRREYTMEDILVKL 123
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 295
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V F +R+ +N +
Sbjct: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGV 100
Query: 296 CLDI----LRAQWSPALTISKVLLSI 361
+D L A W T+ +L+ +
Sbjct: 101 -VDPKKFGLLANWQREYTMEDILVQL 125
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 295
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V F +RI +N + +
Sbjct: 40 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGV 99
Query: 296 C----LDILRAQWSPALTISKVLLSI 361
+L A W T+ +L +
Sbjct: 100 VDSKKFGVL-ANWQRQYTMEDILTQL 124
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 140 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 295
W TI+GP ++ Y+G +F L + DYP PP V F +RI +N +
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGV 98
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +2
Query: 122 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 292
G+D++ W TI+GP + + ++G ++ L + DYP KPP V F +R+ +N
Sbjct: 41 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETG 100
Query: 293 ICLDI----LRAQWSPALTISKVLLSI 361
+ +D L A W T+ +L+ +
Sbjct: 101 V-VDPKKFGLLANWQREYTMEDILVQL 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 122 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 292
G+D++ W TI+GP + + ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 40 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTG 99
Query: 293 IC----LDILRAQWSPALTISKVLLSI 361
+ +L A W T+ +L +
Sbjct: 100 VVDSKKFGVL-ANWQRQYTMEDILTQL 125
>At3g56890.1 68416.m06328 F-box family protein-related predicted
proteins - Arabidopsis thaliana; contains TIGRFAM
TIGR01640: F-box protein interaction domain
Length = 219
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 435 LSVL*ILAISGTKGSSGLGSHRXEQIESNTLD 340
L VL I+A+ G KG + +GS + IES LD
Sbjct: 22 LMVLCIIAVKGLKGYASMGSEEFKFIESECLD 53
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 309 CVHSGHQRSPYPKCCSQSAXFY 374
CV+S + SP PKCC + FY
Sbjct: 219 CVYSQFRSSPSPKCCVSLSAFY 240
>At3g17180.1 68416.m02191 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II SP:P08819
[Triticum aestivum] (Carlsberg Res. Commun.
52:297-311(1987))
Length = 478
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/38 (23%), Positives = 19/38 (50%)
Frame = -2
Query: 235 WFERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIFT 122
W V+ +Y +++ ++ NW+ C + M +FT
Sbjct: 240 WSHAVISDHLYDSAKHNCDFKSSNWSEPCNVAMNTVFT 277
>At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical to
plastid heme oxygenase (HY1) [Arabidopsis thaliana]
GI:4877362, heme oxygenase 1 [Arabidopsis thaliana]
GI:4530591 GB:AF132475; annotation updated per Seth J.
Davis at University of Wisconsin-Madison
Length = 282
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 407 EIARIYKTDREKYNELAREWTRK 475
E++++ + REK N++A EWTR+
Sbjct: 235 ELSQLLQNVREKLNKVAEEWTRE 257
>At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (EXT) (EXGT-A1) identical to endo-xyloglucan
transferase (ext) GI:469484 and endoxyloglucan
transferase (EXGT-A1) GI:5533309 from [Arabidopsis
thaliana]
Length = 296
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 413 QFLAPKGRLGWDRIEXSRLRATLW---IW*ALVTTVHAECQDR 294
++ A +GR+ WD+ E L A W W + T++ C DR
Sbjct: 238 KYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDR 280
>At5g10830.1 68418.m01258 embryo-abundant protein-related similar to
embryo-abundant protein [Picea glauca] GI:1350531
Length = 261
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 87 GIHQHNVRQAHTVKICSIGKP----QLWAQLTVLIKEEFSSLPYISLQTTLSNHQKLHSQ 254
G+H ++ + ++V + KP +W V++ EF ++ Y TTL + + Q
Sbjct: 109 GVHWFDLPRFYSVATRLLRKPGGIIAVWGYNDVIVSPEFDAVQYRLHATTLPFWKYPYIQ 168
Query: 255 HVF 263
H+F
Sbjct: 169 HIF 171
>At3g54850.1 68416.m06077 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 632
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 372 YAIPTQTTLWCQKLLGSIKQTEKSTMN*PVSGRGSMPCDESIVTS 506
Y + + LWC+ + Q + S + G S CD + V S
Sbjct: 305 YVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLS 349
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,914,352
Number of Sequences: 28952
Number of extensions: 300923
Number of successful extensions: 846
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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