BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308A11f (521 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 5.0 AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 5.0 AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 8.7 AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 8.7 AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 8.7 >AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription factor protein. Length = 441 Score = 21.4 bits (43), Expect = 5.0 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = -1 Query: 281 LRCSPTHQSDLKIQQPSSSSPNLLYQ 204 L SP + Q S SPN +YQ Sbjct: 326 LTSSPPPPYQISAQPTPSQSPNQIYQ 351 >AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor protein protein. Length = 585 Score = 21.4 bits (43), Expect = 5.0 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -2 Query: 133 NYICTCTP*F 104 +YICTC P F Sbjct: 44 SYICTCKPGF 53 >AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor (isoform A) protein. Length = 549 Score = 20.6 bits (41), Expect = 8.7 Identities = 7/20 (35%), Positives = 13/20 (65%) Frame = -1 Query: 485 LKHCRWCGLSEQPLMPEMRC 426 LK C G+ + ++PE++C Sbjct: 245 LKKCLSVGMRPECVVPEVQC 264 >AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII protein. Length = 343 Score = 20.6 bits (41), Expect = 8.7 Identities = 10/39 (25%), Positives = 14/39 (35%) Frame = -1 Query: 344 HQTFCQSCSANSPKMVHIQQQLRCSPTHQSDLKIQQPSS 228 HQ QS + +P SP H S P++ Sbjct: 20 HQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAA 58 >AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII protein. Length = 209 Score = 20.6 bits (41), Expect = 8.7 Identities = 10/39 (25%), Positives = 14/39 (35%) Frame = -1 Query: 344 HQTFCQSCSANSPKMVHIQQQLRCSPTHQSDLKIQQPSS 228 HQ QS + +P SP H S P++ Sbjct: 20 HQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAA 58 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 106,224 Number of Sequences: 336 Number of extensions: 1997 Number of successful extensions: 5 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 12573240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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