Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A11f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 56 4e-09
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 54 2e-08
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 50 2e-07
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 43 2e-05
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 39 4e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 38 0.001
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 29 0.56
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 2.2
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 3.0
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 3.9
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 3.9
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 25 5.2
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 6.8
SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces ... 25 6.8
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 9.0
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 55.6 bits (128), Expect = 4e-09
Identities = 41/134 (30%), Positives = 66/134 (49%)
Frame = +2
Query: 116 AGANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVC 295
AG +IV S+ + +LQ++ D ++ I KV+++LG D L+NNA +A
Sbjct: 33 AGIDIVDPSKVQDAALALQADVSKADQIETAI------EKVIQTLGPIDVLINNAGLADD 86
Query: 296 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 475
PF S ++D + ++ + V M + G+IVNI S L Y
Sbjct: 87 TPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYL-GSPAY 145
Query: 476 SASKAALDALTRAM 517
SA+KA L+ LT+A+
Sbjct: 146 SAAKAGLENLTKAL 159
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 53.6 bits (123), Expect = 2e-08
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Frame = +2
Query: 119 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESL-----GHFDALVNNAA 283
G ++A +R +++L + + +D+ D + R+V + + G L+NNA
Sbjct: 29 GFQVLATARQVERMDNLTKA--GLQTLKLDVTDEDSVREVEQEVRKFTNGSLHYLINNAG 86
Query: 284 VAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKD 463
P +D + K DVN V+ +++ ++I K G IVN++S S
Sbjct: 87 APCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK--GTIVNVNSLVSYVPFAF 144
Query: 464 HTIYSASKAALDALTRAM 517
+ Y+ASKAAL A + +
Sbjct: 145 NAAYNASKAALLAYSNTL 162
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 50.4 bits (115), Expect = 2e-07
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Frame = +2
Query: 119 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 298
G N L T L + + ++ I DV D + + + ES+ D +V+ A V
Sbjct: 32 GRNEFHLKETLQSLSVAKGQQHTLTIADVQ-SDMKNLKSIFESV-EIDTVVHAAGVLQSS 89
Query: 299 PFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA---IVNISSQASKAALKDHT 469
+ S D N+ + + +S++ + NK I+NISS+ S AL +
Sbjct: 90 LCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTS 149
Query: 470 IYSASKAALDALTRAM 517
+Y+ASKA L++ T+ +
Sbjct: 150 VYAASKAGLESFTKVL 165
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 43.2 bits (97), Expect = 2e-05
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 119 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVES-LGHFDALVNNAAVAVC 295
G N++A SR + S+ + + D+ E K + G+ D ++NNA +
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLV 88
Query: 296 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 475
F + + +VN V I++ M E+ G I+ ISS A ++Y
Sbjct: 89 GEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMY 148
Query: 476 SASKAALDALTRAM 517
+ASK A++ L++ +
Sbjct: 149 NASKFAVEGLSQTI 162
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 39.1 bits (87), Expect = 4e-04
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 11/165 (6%)
Frame = +2
Query: 56 ILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEY--------PSIDIVDVDI 211
ILVT EL GAN+ ++RT + L+ +E + VD+
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 212 GDWEKTRKVVESLGHF-DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVAR 388
+E ++E L D +V+ A + F + PS F+K N A + + R
Sbjct: 85 TSYESVHSMIERLPFCPDHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCHAAIR 144
Query: 389 KM--IENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAM 517
+M I I+ + S S + ++ YS KAA+ L ++
Sbjct: 145 RMKEISPSYSRRILLVGSLLSSLPIIGYSAYSPVKAAVRNLADSL 189
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 263 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 442
AL+N AA+A L S K F+ NV L I+ + ++++ + +VNI+S
Sbjct: 109 ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDP-NPHVVNIASSL 167
Query: 443 SKAALKDHTIYSASKAALDAL 505
+ + YS+SKAAL +L
Sbjct: 168 AYFSAMGVGAYSSSKAALVSL 188
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.7 bits (61), Expect = 0.56
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 18/177 (10%)
Frame = +2
Query: 44 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIV---DVDIG 214
KG +VT +L +G N+V +SRT+ L++L E ++ V + I
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAID 115
Query: 215 DWEKTRKVVESLGHFD-------ALVNNAAVAVCEP--FLDCSPSNFDKTFDVNVKAVLN 367
+ T + E L H D L+NN + P F + + D +N L+
Sbjct: 116 YTKTTAETFEKL-HQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLH 174
Query: 368 ISQVVARKMIENKTHG------AIVNISSQASKAALKDHTIYSASKAALDALTRAMG 520
++ V M+ + I+ + S A + Y+ SKA L + ++G
Sbjct: 175 TTKAVLSIMLRERQKNEKGPRCLILTMGSFAGLLPSPYLSTYAGSKAFLSNWSASLG 231
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 194 IVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 298
++ VDI D T + + ++GH L N AV C+
Sbjct: 586 VIPVDICDIRLTFQSMSAMGHLTFLDNRIAVVSCD 620
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 281 AVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQV 379
++++ E +DCSPS D+ D ++A+ I ++
Sbjct: 1122 SLSILEKLVDCSPSIIDEQVDTILEALRKIIEL 1154
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 242 ESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVN 349
E+ A VN+A+ V EPF+ NFD + VN
Sbjct: 259 ETAEEIQAKVNDASADVHEPFVYNHFRNFDASMHVN 294
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 179 YPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNA 280
+P+ ++G W R +E+L +FDA N A
Sbjct: 593 FPNSGKTPTEVGVWSIVRGALETLQNFDARNNTA 626
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 5.2
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 296 HIQQQLRCSPTHQSDLKIQQPSSSSPNLLYQRLQCL*RGIHSEDFLSA---NEFVTMQLY 126
HI LR H ++K + PN +YQ + L + H L A + T
Sbjct: 133 HIDDSLR--DVHMPEMKRKFKPPLRPNTMYQTISALPKPRHDPTVLGALVMSRPKTWDPR 190
Query: 125 LHLHAIIQSQFLCRYLARHR 66
H+ +I FL ++L H+
Sbjct: 191 THVDVVI-DPFLSKHLYSHQ 209
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 290 VCEPFLDCSPSNFDKTFDV 346
VC P + P N+D+ FDV
Sbjct: 589 VCPPACNTPPPNYDELFDV 607
>SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 119 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNA 280
G ++ L R H+E S V D E RK + SLG D VN+A
Sbjct: 112 GGEVILLENLRFHIEEEGSAKVDGKKVKADASAVEAFRKSLTSLG--DIFVNDA 163
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 149 RSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHF 259
R LE LQS Y + ++ + E RKVV+ F
Sbjct: 1154 RPKLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKF 1190
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,902,328
Number of Sequences: 5004
Number of extensions: 35724
Number of successful extensions: 130
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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