Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 85 4e-17
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 76 2e-14
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 54 5e-08
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 54 5e-08
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 53 1e-07
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 49 2e-06
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 47 8e-06
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 47 1e-05
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 44 1e-04
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 42 4e-04
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 40 0.001
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 33 0.11
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 32 0.25
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 31 0.58
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 31 0.76
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 29 3.1
SB_37871| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 28 5.4
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 27 9.4
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 27 9.4
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 84.6 bits (200), Expect = 4e-17
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 182 PSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAV 361
PSI V D+ D EK +K++ES FD LVNNA A+ E FL+ P +FD+ + NV+A
Sbjct: 2 PSIQAVCDDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAP 61
Query: 362 LNISQVVARKMIENKTHGAIVNISSQASKAALKDH-TIYSASKAAL 496
L I+Q VA+KM+ GAIVN+SS ++ L + ++ S AAL
Sbjct: 62 LFIAQAVAKKMVAKGEGGAIVNVSSVFTELHLPNSISLGKYSNAAL 107
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Frame = +2
Query: 191 DIVDVDIGDWEK----TRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA 358
+IV +D+G+ + K+++ LG D LVNNA PFLD + + K F V+V
Sbjct: 91 EIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDG 150
Query: 359 VLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAM 517
SQ+ AR+M++ G I+NI+S L D + Y+A+K AL LT+AM
Sbjct: 151 AFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAM 203
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +2
Query: 113 RAGANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAV 292
R GA ++A L+ L S P I+ VD+ D+E +K + D L N A + +
Sbjct: 38 REGAKVIATDINAEKLKELHS-VPGIETRVVDVTDYEAIKKFASEVDRVDVLFNCAGLVL 96
Query: 293 CEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK-AALKDHT 469
+CS +D T D+NVK++ +++ KM + G+I+N++S AS +
Sbjct: 97 GGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKM-RQQGSGSIINMASVASSIKGAPNRF 155
Query: 470 IYSASKAALDALTRAM 517
Y SKAA+ T+A+
Sbjct: 156 AYGTSKAAVIGFTKAI 171
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 54.4 bits (125), Expect = 5e-08
Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Frame = +2
Query: 125 NIVALSRTRSHLESLQSE--YPSIDIVDVDIGDWEKTRKVVES-LGHFDALVNNAAVAVC 295
N+ AL ++ L +E Y D+ D + EK VE G+ L+NNA V
Sbjct: 68 NLEALKAVAQEIQDLGAETHYFECDVRKKD--EVEKVANAVEDQAGNVTILINNAGVVTG 125
Query: 296 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 475
+ FL+CS S+ +TF VN A + Q M+E K G IV+I+S A L Y
Sbjct: 126 KKFLNCSESDVMRTFQVNSLAHIWTIQRFIPSMME-KNRGHIVSIASVAGYFGLVGCVDY 184
Query: 476 SASKAALDALTRAM 517
ASK A L A+
Sbjct: 185 CASKFAAVGLIEAL 198
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 54.4 bits (125), Expect = 5e-08
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +2
Query: 173 SEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAA-VAVCEPFLDCSPSNFDKTFDVN 349
+++ +DI D + E V +S G D ++NNA V P + + FDK DVN
Sbjct: 53 NQFYVVDITDDSVVK-EWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVN 111
Query: 350 VKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAM 517
+K N+ + KMI+ G IVN SS KA Y A+K ++ LTRA+
Sbjct: 112 LKGSANVIRSFLPKMIK-AGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRAL 166
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Frame = +2
Query: 119 GANIVALSRTRSHLESLQSEYPS------IDIVDVDIGDWEK--TRKVVESLGHFDALVN 274
G ++ +R+ +E + E+ S +VD+ + K +++V+ G L+N
Sbjct: 31 GHTVIGCARSHDKIEKINEEFASGKEKRQFYVVDISNDEAVKQWSQQVMLDFGAPSLLIN 90
Query: 275 NAAVAVCEP-FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKA 451
N+ V F + F+K D+N+K N+ + MIE K G IVN +S +
Sbjct: 91 NSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEAKRKGVIVNFTSGWGRC 150
Query: 452 ALKDHTIYSASKAALDALTRAM 517
+ Y +K AL+ L++A+
Sbjct: 151 VAPEVAPYCTTKWALEGLSKAL 172
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = +2
Query: 221 EKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIE 400
E + E G D LVNNA ++ + S +TF+ N VL +S+ V +M
Sbjct: 73 EALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKS 132
Query: 401 NKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAM 517
+ + G I+NISS A + +Y ASK A++ L+ ++
Sbjct: 133 DHS-GHIINISSTAGHTGMPFTGLYCASKFAVEGLSESL 170
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 233 KVVESLGHFDALVNNAAVAV-CEPFLDCSPSN-FDKTFDVNVKAVLNISQVVARKMIENK 406
++VE G D LVNNA + + C P +C+ ++ +K F+ NV ++ ++ V M + +
Sbjct: 108 EIVEKEGRIDVLVNNAGIGLFCVP--ECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQR 165
Query: 407 THGAIVNISSQASKAALKDHTIYSASKAALDALTRAM 517
G +VNI S IY ASK A++ AM
Sbjct: 166 A-GHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAM 201
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 47.2 bits (107), Expect = 8e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +2
Query: 263 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 442
A+VNNA + PF + + FDVNV +LN+++ A + K+ G IVN++S A
Sbjct: 627 AIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTK--AFLPLLKKSCGRIVNVASCA 684
Query: 443 SKAALKDHTIYSASKAALDALTRAM 517
K + YSASK A+ + + A+
Sbjct: 685 GKLPGPGLSAYSASKYAVQSFSDAL 709
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +2
Query: 158 LESLQSEYPSIDIVDVDIGDWEKTRKVVE----SLGHFDALVNNAAVAVCEPFLDCSPSN 325
+ S++S+ + D+ E RK++E + G D LVNNA+
Sbjct: 57 MNSVRSDSAIMLKADLSTNIQETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEET 116
Query: 326 FDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDAL 505
++K VN+ +SQ + ++HG+I+N+ ++ L +H++Y SKA L
Sbjct: 117 WNKLMGVNLSFPFFLSQAAFPHL--KRSHGSIINMIDIHAERPLANHSVYCVSKAGLHMC 174
Query: 506 TRAM 517
T+A+
Sbjct: 175 TQAL 178
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 43.6 bits (98), Expect = 1e-04
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Frame = +2
Query: 104 ELWRAGANIVALSRTRSHLESLQSEYPSID--------------IVDVDIGDWEKTRKVV 241
EL + G +V +R RS LE ++ + +I ++ +D+ +++K ++V
Sbjct: 61 ELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQDILVLPMDVTEYDKHTELV 120
Query: 242 ES-LGHF---DALVNNAAVAVCEPFLDCSPSNFDKTF-DVNVKAVLNISQVVARKMIENK 406
S L HF D L+NN+ + ++ +K D+N AV+++++ V MIE K
Sbjct: 121 RSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERK 180
Query: 407 THGAIVNISSQASKAALKDHTIYSASKAAL 496
+G IV SS A K T Y+A+K A+
Sbjct: 181 -NGHIVVTSSVAGKIGAPMSTSYNATKFAV 209
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 353 KAVLNISQVVARKMIENK-THGAIVNISSQASKAALKDHTIYSASKAALDALTR 511
K + Q A+ M+ENK +G+I+NISS +K+ Y+ASKA ++ LT+
Sbjct: 380 KGTFLMCQTTAKAMVENKINNGSIINISSIVAKSGNMGQANYAASKAGVEGLTK 433
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 305 LDCSPSNFDKTFDVNVKAVLNISQVVARKM---IENKTHGAIVNISSQASKAALKDHTIY 475
LD ++ KT VNV+ N+ Q M GA+VN++S ++ A H Y
Sbjct: 142 LDVEEKDWHKTMSVNVQGYANMVQACHPYMKTACNTGPSGAVVNLASISAHRAQPVHWTY 201
Query: 476 SASKAALDALTRAM 517
S+SK A+ ++T+ M
Sbjct: 202 SSSKGAIISMTKCM 215
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 15/152 (9%)
Frame = +2
Query: 107 LWRAGANIVALSRTRSHLESLQSEYPS-IDIVDVDIGDWEKTRKVV----ESLGHFDALV 271
L RAGA V + S ++ E+ S + + + + + E G +A +
Sbjct: 308 LIRAGARAVIVDLPSSEGQNTAQEFGSHCTFIPGHVDSESEIKAAIKVAKEKYGCVNASI 367
Query: 272 NNAAVAVCEPFLDCS----PSN-FDKTFDVNVKAVLNISQVVARKMIENKT-----HGAI 421
N AA+ E L S P F++T +N N++++VA M N G I
Sbjct: 368 NTAALNTKELTLSESGCPHPLELFEETMKINAVGTFNVARLVAESMATNTPDQEGERGVI 427
Query: 422 VNISSQASKAALKDHTIYSASKAALDALTRAM 517
VN+SS Y+A+K A++A+T M
Sbjct: 428 VNVSSIHGTEGQSGKVAYAATKGAINAMTLPM 459
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Frame = +2
Query: 236 VVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA-----VLNISQVV-----A 385
V +G LVNNA + + FLD KT +VN A LN +V
Sbjct: 124 VKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTV 183
Query: 386 RKMIEN---KTHGAIVNISSQASKAALKDHTIYSASK 487
+ + + K HG +VNI+S A + Y +SK
Sbjct: 184 KSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSK 220
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +2
Query: 263 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 442
AL NNA C P S++ + DVN+ V+++S+ + G +VNISS
Sbjct: 258 ALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFL--PLVKMARGRVVNISSIY 315
Query: 443 SKAALKDHTIYSASKAALDALTRAM 517
+ + Y+ +K ++A + +M
Sbjct: 316 GFFSPIFGSHYAITKYGVEAFSDSM 340
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +2
Query: 266 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQAS 445
LVNNA V + P + + + +VN+ + +++ + K G +VNISS A
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVNISSVAG 98
Query: 446 KAALKDHTIYSASKAALDALTRAM 517
L+ + Y SK + + A+
Sbjct: 99 MVPLQRSSAYCISKFGVSVFSDAL 122
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 320 SNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALD 499
S + K DVN+ +++++ + K G +VNISS A + ++ + YS +K ++
Sbjct: 11 SEYKKMADVNLWGLIDVTLTFLPLI--RKCGGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 500 ALTRAM 517
A + A+
Sbjct: 69 AFSDAL 74
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 30.7 bits (66), Expect = 0.76
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Frame = +2
Query: 50 KRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS-IDIVDVDIGDWEK 226
K +L+T L + G +++A RTR +SL+ + + +D+ D
Sbjct: 42 KFVLITGSSSGMGRETAIALDKLGFHVLATCRTRKGEDSLRLDCSERMRTYVMDVSDTVS 101
Query: 227 TRKVVESLGHFD--------ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVV 382
R V + + LVNNA + P S + +T DVN+ ++++++
Sbjct: 102 VRSVYQQILQLLESEQQGLWGLVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTKTF 161
Query: 383 ARKMIENKTHGAIVNI-SSQASKAALKDHTIYSASKAAL 496
+ K G +VN+ SS ++ L+ T S +A+
Sbjct: 162 LPLL--KKAKGRVVNMGSSCGAEEMLRFDTFASPETSAV 198
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +1
Query: 409 SWC-HCQHLISGI--KGCSERPHHLQCFKSC 492
++C HC L+ GI +GC R H+ C KSC
Sbjct: 361 TYCDHCGGLLRGIIKQGCRCRDCHINCHKSC 391
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/97 (21%), Positives = 45/97 (46%)
Frame = +2
Query: 218 WEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMI 397
+E+ ++V+ S A+ NNA P ++ + DVN+ ++++S+ +
Sbjct: 451 FEQVKRVLPSGTGLWAVYNNAGYMTLAPLEWFPLDDYKRMADVNLWGLVDVSKTFL--PL 508
Query: 398 ENKTHGAIVNISSQASKAALKDHTIYSASKAALDALT 508
G +VN++S A + YS +K ++A +
Sbjct: 509 VKMARGRVVNVASTVGLIANELTAPYSITKYGVEAFS 545
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 326 FDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASK 487
FDKTFD+ VKAV + +I +TH +I + Q+ + HT+ + SK
Sbjct: 1000 FDKTFDMQVKAV-SSEGTFEVDLISMETHKSIRDQLIQS--VTIPKHTLQTGSK 1050
>SB_37871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 209 IGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVV 382
I D K + S+GH+ +N + E + D ++FD T + + NI V
Sbjct: 26 ISDKRKGHASMGSIGHYSGDESNVSTGTFEDYSDSESTHFDHTTNEESSSDENIDDTV 83
>SB_14963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 290 QQQLRCSPTHQSDLKIQQPSSSSPNLLYQRLQ 195
Q+Q R PTHQ D+++Q+ +L Q Q
Sbjct: 102 QKQKRQEPTHQQDVEVQEAQQKVDDLTRQNRQ 133
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = -2
Query: 394 HFPCNYLTYI*DCFNIYIKRFVKVARRTVQKWFTYSNSCVVHQRIKVT*RFNNLPRLLPI 215
++P YL Y N+ KRF +A T K N + ++ + F N P I
Sbjct: 1562 YWPGKYL-YANGEVNVQDKRFEIIANHTCTKTSICLNGSLGEEQHNIFFNFTNKPTNFSI 1620
Query: 214 SYINVYNVYRGVFTLKTF 161
YN+ L TF
Sbjct: 1621 QTTGKYNIAEKEAVLNTF 1638
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 340 KRFVKVARRTVQKWFTYSNSCVVHQRIKV 254
++F+K+++ +V WFT ++ V R+K+
Sbjct: 307 QKFLKLSKESVDDWFTQQSTTVEGARLKL 335
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 340 KRFVKVARRTVQKWFTYSNSCVVHQRIKV 254
++F+K+++ +V WFT ++ V R+K+
Sbjct: 1344 QKFLKLSKESVDDWFTQQSTTVEGARLKL 1372
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,999,963
Number of Sequences: 59808
Number of extensions: 254718
Number of successful extensions: 688
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -