Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    37   0.32 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.43 
UniRef50_Q8ZXV7 Cluster: Putative uncharacterized protein PAE107...    35   0.98 
UniRef50_Q7QXN4 Cluster: GLP_512_30439_29078; n=1; Giardia lambl...    33   5.2  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 335 AGWWYLPVRSHERSYH 288
           A WWYLP R+H+RSYH
Sbjct: 569 AEWWYLPARTHKRSYH 584


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 521 LLLRCVDELTAHLVLSGY 468
           LLLR VDELTAHLVLSGY
Sbjct: 155 LLLRWVDELTAHLVLSGY 172


>UniRef50_Q8ZXV7 Cluster: Putative uncharacterized protein PAE1074;
           n=3; Pyrobaculum|Rep: Putative uncharacterized protein
           PAE1074 - Pyrobaculum aerophilum
          Length = 184

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 483 GVKRLLKLIDIYKLNAPPTLRYKF*GLKYSYNGCPTLQTETYYW 352
           G+K+L+KL+ + +  A P L  +   +KY Y G P  ++E Y W
Sbjct: 21  GIKKLMKLVFLLQYEARPRLGRRI-VVKYLYEGQPVARSEFYIW 63


>UniRef50_Q7QXN4 Cluster: GLP_512_30439_29078; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_512_30439_29078 - Giardia lamblia
           ATCC 50803
          Length = 453

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 501 RAHSPPGVKRLLKLIDIYKLNAPPTLRYKF*GLKYSYNGCPTLQTETYYWFMAEI 337
           R H  P  +RL  L++ + L + PT   +  G+K   N  PTL   + Y +++ I
Sbjct: 256 REHCTPNYERLRILLETHSLVSIPTAEAQLVGMKVVQNMLPTLTATSKYAYLSGI 310


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,849,986
Number of Sequences: 1657284
Number of extensions: 11495473
Number of successful extensions: 23230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23225
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)