Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 180  YLELAPI-KIFIIYFAMLYLQTVIRVYQH 97
            YL+L PI  +F+ +FA++ +   + +  H
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFH 1348


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 180  YLELAPI-KIFIIYFAMLYLQTVIRVYQH 97
            YL+L PI  +F+ +FA++ +   + +  H
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFH 1348


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 180  YLELAPI-KIFIIYFAMLYLQTVIRVYQH 97
            YL+L PI  +F+ +FA++ +   + +  H
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFH 1348


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 180  YLELAPI-KIFIIYFAMLYLQTVIRVYQH 97
            YL+L PI  +F+ +FA++ +   + +  H
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFH 1348


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 189 KNSYLELAPIKIFIIYFAMLYLQTVIRVYQHHNY 88
           + S + L    +F+  + M    TV+RV + +NY
Sbjct: 486 QQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNY 519


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 318 TRAESREILPLVNDYELSCMDGGSG 244
           + A + + + LVNDY  +C  G  G
Sbjct: 308 SNAGTLDCVQLVNDYHCNCKLGFMG 332


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 420 YKF*GLKYSYNGC 382
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -1

Query: 137 LCYICKRSYVFISTTIITDVQTR 69
           +C+IC+   +F+   ++T  + R
Sbjct: 113 ICHICELHTIFLVCNVLTVFKIR 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,408
Number of Sequences: 336
Number of extensions: 2977
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)