Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   2.7  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   6.2  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.2  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 98  TTIITDVQTRRPGYRLDGFSLD 33
           T I+TDV    P +R DG+  +
Sbjct: 385 TVIVTDVNDEIPRFRSDGYECE 406


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/50 (22%), Positives = 20/50 (40%)
 Frame = +1

Query: 31  WSKLKPSRRYPGRRVWTSVIIVVLINTYDRLQI*HSKVNYKDFYGC*FKV 180
           W+  KP +  PG  +W           YD L +    +  +  YG  +++
Sbjct: 34  WASAKPYKSIPGPTLWQLFRGFSKGGCYDGLNLIELHIRLRQEYGDIYRI 83


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 193 FSSATGASHYSTSGGCRSASPIHT 264
           F  +   SH S+S  C SA+P  T
Sbjct: 346 FDPSALTSHRSSSANCSSAAPKST 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,468
Number of Sequences: 2352
Number of extensions: 12750
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)