Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113638-1|AAM29643.1|  736|Drosophila melanogaster RH73613p pro...    29   2.9  
AE013599-3011|AAF57468.3|  774|Drosophila melanogaster CG33041-P...    29   2.9  
AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p pro...    28   8.8  
AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-P...    28   8.8  

>AY113638-1|AAM29643.1|  736|Drosophila melanogaster RH73613p
           protein.
          Length = 736

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -3

Query: 330 VVVPTRAESREILPLVNDYELSCMDGGSGPAPA*CGVMTSSRGTTEYKNSY 178
           ++V  + E+R  L   N Y+LSC+  G+ PAP     +T  +G+T  KN++
Sbjct: 279 LIVKLQGENRA-LSAGNSYQLSCVVIGARPAP----TITWWKGSTPMKNTH 324


>AE013599-3011|AAF57468.3|  774|Drosophila melanogaster CG33041-PA
           protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -3

Query: 330 VVVPTRAESREILPLVNDYELSCMDGGSGPAPA*CGVMTSSRGTTEYKNSY 178
           ++V  + E+R  L   N Y+LSC+  G+ PAP     +T  +G+T  KN++
Sbjct: 279 LIVKLQGENRA-LSAGNSYQLSCVVIGARPAP----TITWWKGSTPMKNTH 324


>AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p
           protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 354 WFMAEIGRVVVPTRAESREILPLVND-YELSCMDGGSGPAPA 232
           W++ E G  +V T   S ++  +VND       D G G  PA
Sbjct: 12  WYLTEEGLKIVTTAVGSEDVRKIVNDALNRDLRDIGGGALPA 53


>AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-PA
           protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 354 WFMAEIGRVVVPTRAESREILPLVND-YELSCMDGGSGPAPA 232
           W++ E G  +V T   S ++  +VND       D G G  PA
Sbjct: 12  WYLTEEGLKIVTTAVGSEDVRKIVNDALNRDLRDIGGGALPA 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,183,706
Number of Sequences: 53049
Number of extensions: 548872
Number of successful extensions: 1094
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)