Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A07f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22D56 Cluster: Insect antifreeze protein; n=2; Alveola...    33   5.2  
UniRef50_A5N2T3 Cluster: CbiQ; n=1; Clostridium kluyveri DSM 555...    32   6.9  
UniRef50_A2DYT4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q22D56 Cluster: Insect antifreeze protein; n=2;
            Alveolata|Rep: Insect antifreeze protein - Tetrahymena
            thermophila SB210
          Length = 4016

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -2

Query: 466  ITAEIIQHSRLI*MAKFKNLQLSRLLSKVAICAFGQKKFIDMSIQIYLNIIVSFKEYGSK 287
            +T  + Q   +I   KF+N+QL+ L S + I   G   FI  S Q  LN+   F++Y  K
Sbjct: 3097 VTVNLNQQKNII---KFQNIQLNILQSSLYISILGGSNFIS-SYQNQLNLTSKFRDYEIK 3152


>UniRef50_A5N2T3 Cluster: CbiQ; n=1; Clostridium kluyveri DSM
           555|Rep: CbiQ - Clostridium kluyveri DSM 555
          Length = 262

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = -1

Query: 236 VPKSFVTANGIQSQ*FVFLIYQSLSKSQIAAFDNSRLNYNTLHSIQSSI*LYVYCLFL 63
           VPK FV   G+  + F+F++  + +   I+   NSRL Y+T+ +  +S+   + CLF+
Sbjct: 148 VPKLFVELMGLIYR-FIFVLLDTANMIFIS--QNSRLGYSTIKASYNSLGKLISCLFI 202


>UniRef50_A2DYT4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 217

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 175 TNHCPKVRLPPLIIVDSIIIHYIQFNPAFNFMFIVCF*GNFILLILTS 32
           T+H PKV  P + ++D ++I Y Q++  F F+  +     F L++  S
Sbjct: 37  TDHSPKVLFPSIALIDILLILYNQYDLGF-FVLALLVASTFYLILALS 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,302,975
Number of Sequences: 1657284
Number of extensions: 8137646
Number of successful extensions: 14280
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14280
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)