Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.94 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   3.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   5.0  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 396 VYYQR-WQSVHLDKKNLL 346
           VY  R WQ +HL+KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 106 QFNPAFNFMFIVCF*GNFILLI 41
           + N  F F  ++C   NF+LLI
Sbjct: 149 EINGIFAFQVLMCTSMNFVLLI 170


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 258 VNY*PLFNAGFEPYSL 305
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 112 YIQFNPAFNFMFIVCF*GNF 53
           Y+Q N  F F+   C   NF
Sbjct: 17  YLQHNQIFGFVTFTCTRSNF 36


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 112 YIQFNPAFNFMFIVCF*GNF 53
           Y+Q N  F F+   C   NF
Sbjct: 35  YLQHNQIFGFVTFTCTRSNF 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,641
Number of Sequences: 336
Number of extensions: 2483
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)