BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308A06f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0650 - 18411588-18411645,18412020-18412172,18412340-184124... 111 3e-25 08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 31 0.56 03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 3.0 05_07_0262 + 28769335-28769391,28769732-28769855,28770175-287702... 28 5.2 05_01_0009 - 64754-65073,65202-65469 28 5.2 12_02_0143 - 14354323-14354463,14354733-14354837,14355515-143558... 27 6.9 07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 27 6.9 04_03_0661 - 18468244-18469580,18469610-18469619 27 6.9 01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 27 6.9 09_06_0232 - 21737299-21739233 27 9.1 02_04_0374 - 22455844-22455961,22456056-22456777,22456977-22457552 27 9.1 >04_03_0650 - 18411588-18411645,18412020-18412172,18412340-18412407, 18412499-18412600,18412695-18412766,18412843-18412891, 18412971-18413104,18413488-18413554,18414471-18414574, 18414677-18414793,18415538-18415647,18415763-18415772 Length = 347 Score = 111 bits (267), Expect = 3e-25 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 2/151 (1%) Frame = -1 Query: 521 EVPIVIRNSPLTNIMISELTEMIPEEEGS-KFLDLGTASVLEGQLRSLMERVDELNQEAI 345 E+PI + NS L + ++EL P + L L TA +E L L+ +D+L+ E Sbjct: 195 EIPIKVSNSALVSAFMTELEPESPVSQCDFDRLKLSTAPFMERNLEFLIGCMDDLSSEQN 254 Query: 344 KFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEED-VNKLFKPHPVPPRLNPM 168 KF Y + V RQQ + W+ KR QEN AR A E PLPEED N +FKP P P RL Sbjct: 255 KFQYYYRNVSRQQSQQQAWLQKRRQENMARKAAGEEPLPEEDPSNPIFKPIPEPSRLEGY 314 Query: 167 IVAGQIDTYSQHISQFCSQSLAKLYLTQALQ 75 +V QI +Y HI+ Q+ +LYL +ALQ Sbjct: 315 LVTNQISSYCNHINGVAGQNFNRLYLMKALQ 345 >08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568, 17823948-17824061,17824145-17824297,17826928-17827071, 17827162-17827516,17828574-17828741,17829522-17829751, 17829916-17830049,17830686-17830749 Length = 1163 Score = 31.1 bits (67), Expect = 0.56 Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Frame = -1 Query: 389 RSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNK 210 ++ M++V +LNQ+ + +QQ V +QQQ + + ++ Q + A P++ ++ Sbjct: 956 QNFMQQVQQLNQQMV---LWQQQVQQQQQQQQQQQQQQQQLQLQQHALPVQQQPDQKYSQ 1012 Query: 209 LFKPHPVPPRLN-PMIVAGQIDTYSQHI--SQFCSQSLAKLYLTQALQNAKEAKQ 54 L N P + Q+D S+ + Q Q ++YL Q Q ++ +Q Sbjct: 1013 LPSSGDTRHEQNKPQKLESQMDHQSELVQQQQVYFQQQQQMYLMQQQQMYQQQQQ 1067 >03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771, 15796089-15796272,15796349-15796696,15796753-15797450, 15798208-15798900 Length = 2299 Score = 28.7 bits (61), Expect = 3.0 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = -1 Query: 407 VLEGQLRS--LMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETP 234 VLE Q R+ ++ + +E + I+ +Q +V ++ W+ ++ + AA+ A+++ Sbjct: 487 VLEEQARAREIVRKQEEERERLIREEEERQRLVEEEARHAAWLAEQERLEAAKRAEEQRI 546 Query: 233 LPEEDVNK 210 EE+ K Sbjct: 547 AREEEKRK 554 >05_07_0262 + 28769335-28769391,28769732-28769855,28770175-28770266, 28770673-28771078,28772057-28772184,28772273-28772332, 28772814-28772963,28772999-28773061,28773062-28773217, 28773361-28773572,28773698-28773796,28774343-28774512, 28774592-28775040 Length = 721 Score = 27.9 bits (59), Expect = 5.2 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -1 Query: 230 PEEDVNKLFKPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLA 102 P++ +++ + H VP R+N + + +D Y H SQ +Q+ A Sbjct: 607 PQQQISQAYGYHQVPARMNCVEQSQAMDAYKMH-SQSQTQAYA 648 >05_01_0009 - 64754-65073,65202-65469 Length = 195 Score = 27.9 bits (59), Expect = 5.2 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -1 Query: 479 MISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRY 330 MIS L P + D G L G++R L+ +VD++ NR+ Sbjct: 146 MISSLLGRSPTATATASHDHGAKLALAGEMRGLLAKVDKMLSATTPANRH 195 >12_02_0143 - 14354323-14354463,14354733-14354837,14355515-14355815, 14356065-14356261,14356412-14356940,14357842-14358848 Length = 759 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -1 Query: 437 SKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLV 318 SKF +G + L+G++ S + DE EA + R+Q+ V Sbjct: 160 SKFFPMGKTNALQGRISSFQQTRDESFPEA--WERFQEYV 197 >07_03_0196 + 14995224-14995489,14995859-14995877,14996703-14996839, 14998365-14998457,15001597-15001932,15003035-15003503 Length = 439 Score = 27.5 bits (58), Expect = 6.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 186 RDWMRFKEFVHVFFWQWGLIFSSPSSIFLC 275 + W R KE +F W+W + S+P S C Sbjct: 128 QQWQRNKE---IFLWRWPTLGSNPGSATAC 154 >04_03_0661 - 18468244-18469580,18469610-18469619 Length = 448 Score = 27.5 bits (58), Expect = 6.9 Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = -1 Query: 347 IKFNRYQQLVVRQQQDKHRWMVKRAQEN-AARAAKDETPLPEEDVNK 210 I+ + ++ +Q++ + +++ K+ QE AARAA++E EE+ + Sbjct: 82 IQRRKEEEKAEKQRRKEAKYLAKKMQEEEAARAAEEERKRKEEEAKR 128 >01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937, 4256034-4256255,4256829-4257023,4257097-4257243, 4257323-4257472,4257762-4257892,4257978-4258194 Length = 845 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/102 (16%), Positives = 46/102 (45%) Frame = -1 Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPE 225 +E + + M+R ++Q A N ++ + + ++ Q+ + ++ E L E Sbjct: 685 IEARYKEWMDRGPSIDQLAYCINSFRDAALSKDPKFDHIEMEEKQKVINQCSEAEVWLRE 744 Query: 224 EDVNKLFKPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLAK 99 K+ + +P NP++++ + ++ + +FC + K Sbjct: 745 ----KIQQQDALPKHANPVLLSSDLKKKAETVDRFCKPIMMK 782 >09_06_0232 - 21737299-21739233 Length = 644 Score = 27.1 bits (57), Expect = 9.1 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -2 Query: 388 AVSWNVLMN*IKKRSSSIGTNSWWSGSNKTSIVGW 284 AVSW ++ + KR+S W+ + SI+ W Sbjct: 277 AVSWTSMLCALAKRASIDAARDWFEQIPEKSIISW 311 >02_04_0374 - 22455844-22455961,22456056-22456777,22456977-22457552 Length = 471 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 240 DPIAXXXREQTL*TSSSPAKVESYDRSR 157 +PIA E + TSSSP VES D +R Sbjct: 294 EPIADPQDENAVATSSSPHVVESSDANR 321 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,424,990 Number of Sequences: 37544 Number of extensions: 277697 Number of successful extensions: 798 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 797 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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