Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A06f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33661| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 5e-31
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 36 0.027
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_39000| Best HMM Match : TolA (HMM E-Value=0.55) 32 0.25
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_10452| Best HMM Match : TP2 (HMM E-Value=9.5) 30 1.3
SB_33825| Best HMM Match : Bacteriocin_II (HMM E-Value=5.5) 29 2.3
SB_10802| Best HMM Match : Rho_N (HMM E-Value=0.0022) 29 2.3
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 2.3
SB_15202| Best HMM Match : Rho_N (HMM E-Value=2.3e-05) 29 3.1
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 28 4.1
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 4.1
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 28 4.1
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 28 5.4
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 7.1
SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_39414| Best HMM Match : rve (HMM E-Value=0.0011) 27 7.1
SB_31736| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_20620| Best HMM Match : zf-HIT (HMM E-Value=8.5e-10) 27 7.1
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 27 9.4
SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2) 27 9.4
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 27 9.4
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 27 9.4
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 27 9.4
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 27 9.4
SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_33661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 130 bits (315), Expect = 5e-31
Identities = 59/126 (46%), Positives = 89/126 (70%)
Frame = -1
Query: 521 EVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 342
E+P+VI+NS L N+++ EL E P +FL L T S LE +R LME VDEL Q++ K
Sbjct: 242 EIPLVIKNSSLMNVLLCELDENTPTPSADQFLTLSTGSYLEKNVRVLMESVDELCQDSNK 301
Query: 341 FNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIV 162
++ YQ+ V+RQQQ K ++ +R QEN +R + E PLP+ED++K+FKP PVP RL+ +++
Sbjct: 302 YHNYQRSVIRQQQQKENYLQRRQQENQSRIQRGEDPLPDEDLSKMFKPLPVPSRLDNLLL 361
Query: 161 AGQIDT 144
+ Q++T
Sbjct: 362 SEQVNT 367
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 35.5 bits (78), Expect = 0.027
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = -1
Query: 476 ISELTEMIPEEEGSKFLDLGTASV-LEGQLRSLMERVDELNQEAIKFNRYQQ---LVVRQ 309
+ + T +I + E +K LG A LEG+ R L E VD LN++ K Q L +R
Sbjct: 543 LQQATLVISQHE-AKMKSLGIAMKDLEGKKRVLEEAVDSLNEDIAKLKAEAQMHVLALRD 601
Query: 308 QQDKHRWMVKRAQENA--ARAAKD 243
++ +H M+ A++ A + A KD
Sbjct: 602 KEQEHEGMLGNAKQVACLSNARKD 625
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 34.3 bits (75), Expect = 0.062
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -1
Query: 467 LTEMIPEEEGSKFLDLGTA-SVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHR 291
+ + + +E+G K + E Q+RSL+ R+D + ++ K + +++VV+ QQ +
Sbjct: 864 MAQSLVQEKGRKLASYRSEMDEKENQIRSLLNRIDSVEKDNTKLKK-EKVVVQFQQGAMK 922
Query: 290 WMVKRAQENAAR 255
+ A+EN+ +
Sbjct: 923 HQLAEAEENSKK 934
>SB_39000| Best HMM Match : TolA (HMM E-Value=0.55)
Length = 576
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = -1
Query: 449 EEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQ 270
E+E + L+G + +ER E EA K +R+++DK R M ++ Q
Sbjct: 429 EQEKEALRTAELEATLQGSKKKDLERTTE---EARKVVADLDEGIREEEDKRRGMERKRQ 485
Query: 269 ENAARAAKDETPLPEEDVNKLFK 201
E K E + + ++ KLF+
Sbjct: 486 EKELEKRKAERDIEDCEMRKLFE 508
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -1
Query: 380 MERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFK 201
+E + + +EA+++ R Q L RQQ + + RA E ARA+ P V+ +
Sbjct: 1010 LETIMDREREALEYQRQQLLAERQQFHQEQL---RAAELRARASHMSPSTPTSTVHNAPQ 1066
Query: 200 PHPVP 186
H VP
Sbjct: 1067 AHAVP 1071
>SB_10452| Best HMM Match : TP2 (HMM E-Value=9.5)
Length = 177
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = -1
Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPE 225
L+G++RS++E L + +K RY+Q++ + + + RA AR A PLP
Sbjct: 40 LDGEMRSILENTS-LPLD-VKVRRYEQVLSQYLKWMEQVKPTRAPRPVARPATALPPLPS 97
Query: 224 EDVNKLFKPHPVPPRLNPMIVAGQID 147
P PP P V + D
Sbjct: 98 PPSQAEQPLLPSPPTGTPASVPSRRD 123
>SB_33825| Best HMM Match : Bacteriocin_II (HMM E-Value=5.5)
Length = 243
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 179 LNPMIVAGQIDTYSQHISQFCSQSLAKLYL 90
LNPM +AG +DT +S + ++KL+L
Sbjct: 3 LNPMPIAGGLDTTEMKLSTYSKFPISKLFL 32
>SB_10802| Best HMM Match : Rho_N (HMM E-Value=0.0022)
Length = 178
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 299 KHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQI 150
++ WM+K A A +TP P KL K P+PPR+ P +G++
Sbjct: 28 RYYWMLKAGLVEALTNAPPQTP-PA----KLIKGLPLPPRIIPSNTSGRV 72
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = -1
Query: 410 SVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPL 231
S+ Q + ER + + +A+ + L + ++ WM+K A A +TP
Sbjct: 123 SLRHKQFNKMEERTVK-DLKALTVRDLKALAKERGIPRYYWMLKAELVEALTNAPPQTP- 180
Query: 230 PEEDVNKLFKPHPVPPRLNPMIVAGQI 150
P KL K P+PPR+ P +G++
Sbjct: 181 PA----KLIKGLPLPPRIIPSNTSGRV 203
>SB_15202| Best HMM Match : Rho_N (HMM E-Value=2.3e-05)
Length = 416
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 299 KHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQI 150
++ WM+K A A +TP P KL K P+PPR+ P +G++
Sbjct: 28 RYYWMLKAELVEALTNAPPQTP-PA----KLIKGLPLPPRIIPSNTSGRV 72
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = -1
Query: 479 MISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQD 300
++SELT+ EG K + VL+ ++ L R+ + NQ+ K + + + +
Sbjct: 204 LVSELTKKFEMLEGQKSSLVEENKVLQDSVKDLKIRLKKSNQDLNKITEELKSTLEEIEM 263
Query: 299 KHRWMVKRAQENAARAAKDETPLPEEDVNKLFK 201
+ K +E +K+++ L E++ NK K
Sbjct: 264 VKKKGNKDLEEKVGVLSKEKSNL-EKEANKYRK 295
>SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = -1
Query: 419 GTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDE 240
G A +E +L R DEL QEA K + + Q+ +K R +R +E A ++
Sbjct: 107 GKAQCIERTAVALRVRGDELLQEARKL----RFLENQKIEKQRLAREREEEEAKEEERET 162
Query: 239 TPLPEEDVNKLFKPHPV 189
T EE+V K P+
Sbjct: 163 T--EEEEVEKPSDEEPL 177
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 239 TPLPEEDVNKLFKPHPVPPRLNPMIVAGQ 153
TP ++V + PHP PPR+ P+ V Q
Sbjct: 214 TPRSRQEVASVPHPHPPPPRVVPLPVVVQ 242
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = -1
Query: 371 VDELNQEAIKFNRYQQLVVRQQQDKHR---WMVKRAQENAARAAKDE-TPLPEEDVNKLF 204
+ L + + R V+RQ QD+++ ++ R ++ ++ TP PE + L+
Sbjct: 1014 ISPLTESEVGTLRKSDQVLRQYQDENKIPSYLESRGKDTDRYSSNTMYTPTPESSSSSLY 1073
Query: 203 KPH 195
KPH
Sbjct: 1074 KPH 1076
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 407 VLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQD--KHRWMVKRAQENAARAAK 246
+LE L++ RV EL ++ K YQ+ V+ Q+++ + R ++ ++ A A K
Sbjct: 114 ILEQDLKAKTNRVKELERDHAKCRDYQKAVIFQEKELQEARSTIRELRQQLADADK 169
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = -1
Query: 395 QLRSLMERVDELNQEAIKFNRYQQLVV----RQQQDKHRWMVKRAQENAARAAKDET--P 234
+L SL++++DE NQ+ N + ++ +DK++ + K+ QE + K ET
Sbjct: 397 ELSSLVKKLDEKNQQLATRNAELMSELENSNKEHRDKNKRLEKKNQELTQNSRKLETKNK 456
Query: 233 LPEEDVNKLFKPHPV 189
L E++N L K + V
Sbjct: 457 LLLEELNSLKKKNSV 471
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHR 291
++ +L L+E++ +N+EA+ + ++QQ KHR
Sbjct: 45 MDAKLEGLIEKIYIINKEALLLGDFNINFLKQQNHKHR 82
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 378 HETAKLSFENRCSTQIQKLGSFLFRYHLGELRDH 479
H + ++S R ST Q L LFR H+G LRDH
Sbjct: 800 HHSTRVS-AYRPSTNTQVLIPALFRGHMGLLRDH 832
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -1
Query: 269 ENAARAAKDETPLPEEDVNKLFKPHPVP----PRLNPMIVAGQIDTYS 138
E+ +AA TP+ + V P P P P+L+P AG T S
Sbjct: 445 EDLGQAAYQSTPISKPSVKSRLGPRPAPVPEPPKLDPSFFAGLAATNS 492
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -1
Query: 278 RAQENAARAAKDETPLPEEDV------NKLFKPHPVPPRLNPMIVAGQIDT 144
R + N++ K PLP+ V NK+ P P+PPR + I + + D+
Sbjct: 212 RPRTNSSNKKKSAPPLPKHVVSPVKRPNKVKAPPPIPPRASESIESKESDS 262
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -1
Query: 467 LTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRW 288
+T++IP EG+ + G V G + + + + + A++ L V + + W
Sbjct: 3 ITDLIPSLEGNPYFSAGFGLVGVGAVLAALRKGSQHGLVALRRFALTTLEVPSKDKSYHW 62
Query: 287 MVK--RAQENAARAAKDETPLPEEDVNKLFKPHPVPP 183
+++ AQ + A+ ET + + ++ + P
Sbjct: 63 VLQWITAQASRAQHLSVETTFQQHETGRVSTRYDFAP 99
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 377 ERVDELNQEAIKF-NRYQQLVVRQQQDKHRWMVKRAQ-ENAARAAKDETPLPEEDVNKLF 204
+++++L +E K +R +L + D VK Q E A A + TP P+
Sbjct: 242 KKLEDLIKELNKLKSRVNELPTKDDLDNLDIYVKWPQLEEALNARRTRTPTPKPRTPTPS 301
Query: 203 KPHPVPPRLNP 171
P P PP +P
Sbjct: 302 PPTPTPPPRSP 312
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 506 IRNSPLTN-IMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 342
+R TN I+ +T+ E E F G AS E +++ L + D+LN+E IK
Sbjct: 1654 LREEVSTNKTTITNVTKRRDELEKENFSLRGQASDAEMKIKGLEQDNDDLNRELIK 1709
>SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 341 FNRYQQLVVRQQ--QDKHRWMVKRAQENAARAAKDETPLPEED 219
F QQ+ RQQ ++W Q+ A KDETP P D
Sbjct: 448 FPANQQVDFRQQFQPSANQWQQAPDQQQFPMAKKDETPEPSSD 490
>SB_39414| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 269
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 245 DETPLPEEDVNKLFKPHPVPPRLNPMIVAGQID 147
D+ P P D ++F+P + PRLN +V Q+D
Sbjct: 233 DQPPEPAFDTAQVFEPASLQPRLNDYLVY-QVD 264
>SB_31736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = -1
Query: 269 ENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLAKLYL 90
+N R + +T + + L P P+P P+ A ID Y +Q K+Y
Sbjct: 898 DNDIRETQRQTDVHDTQQQHL-PPPPIPSPNQPVSTAQYIDQYGDDNDIRKTQRQTKMYT 956
Query: 89 TQAL 78
TQ L
Sbjct: 957 TQQL 960
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 203 KPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLAKLYLTQAL 78
+P P+P P+ A ID Y +Q K+Y TQ L
Sbjct: 833 RPPPIPSPNQPVSTAQYIDQYDDDNDIRKTQRQTKMYTTQQL 874
>SB_20620| Best HMM Match : zf-HIT (HMM E-Value=8.5e-10)
Length = 567
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -1
Query: 374 RVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPH 195
R D +Q+ N +L+ Q+ + H + A KD P+P E L P
Sbjct: 234 RTDRPSQQLRSLNGEWRLMRPQRSESHSAL------RPLGAVKDTRPIPREGAGGLNAPP 287
Query: 194 PVPPR 180
P PP+
Sbjct: 288 PPPPQ 292
>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
Length = 324
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 311 QQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPM 168
+Q+ K + +E AKD+ P P+ + ++ P +PP P+
Sbjct: 92 KQEKKPKKASSEKKEPEEVTAKDQAPTPQASLEEVEPPKDIPPLPPPV 139
>SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2)
Length = 611
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 407 VLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQ 303
V+ QLR ME + +EA+ + Q++++ +QQ
Sbjct: 183 VIAEQLRGQMEELKLREEEAVMLKKEQEMLIAEQQ 217
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 403 SKDNFAVSWNVLMN*IKKRSSSIGTNSWWSGSNK 302
S D+ AV WN + SSS T+ W SGS +
Sbjct: 1135 SMDDSAVQWNSKEKSPRSHSSSDQTSGWNSGSQQ 1168
>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHR 291
++ +L L+E++ N+EA+ + ++QQ KHR
Sbjct: 284 MDAKLEGLIEKIYIANKEALLLGDFNINFLKQQNHKHR 321
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHR 291
++ +L L+E++ N+EA+ + ++QQ KHR
Sbjct: 89 MDAKLEGLIEKIYITNKEALLLGDFNINFLKQQNHKHR 126
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 404 LEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHR 291
++ +L L+E++ N+EA+ + ++QQ KHR
Sbjct: 505 MDAKLEGLIEKIYITNKEALLLGDFNINFLKQQNHKHR 542
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 362 LNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEE-DVNKLFKPHPVP 186
+ E +K + L + ++ WM +RA+ A + P P + KL K P P
Sbjct: 5 IEMENLKVKDLKALAKERGIPRYYWM-RRAELVGALTSTSPPPPPRRVPLPKLVKGLPRP 63
Query: 185 PRLNP 171
PR+ P
Sbjct: 64 PRITP 68
>SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 362 LNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEE-DVNKLFKPHPVP 186
+ E +K + L + ++ WM +RA+ A + P P + KL K P P
Sbjct: 5 IEMENLKVKDLKALAKERGIPRYYWM-RRAELVGALTSTSPPPPPRRVPLPKLVKGLPRP 63
Query: 185 PRLNP 171
PR+ P
Sbjct: 64 PRITP 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,155,400
Number of Sequences: 59808
Number of extensions: 296295
Number of successful extensions: 938
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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