Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   5.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 140 GRNSTMNQPNLNTYKSRLTPYF 205
           G++ ++ Q  LN +KS L P F
Sbjct: 16  GKSLSIPQQILNEFKSTLLPLF 37


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 407 KCIYSFVHVKYLQKK 363
           KCIY F    YL+KK
Sbjct: 229 KCIYVFNPRYYLEKK 243


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 407 KCIYSFVHVKYLQKK 363
           KCIY F    YL+KK
Sbjct: 229 KCIYVFNPRYYLEKK 243


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 152 TMNQPNLNTYKSRLTP 199
           ++NQP LN + + +TP
Sbjct: 61  SINQPYLNHFDNSVTP 76


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 296 LNINICVYRKFVKC 255
           L +NIC Y + V+C
Sbjct: 483 LELNICNYPQVVQC 496


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 152 TMNQPNLNTYKSRLTP 199
           ++NQP LN + + +TP
Sbjct: 61  SINQPYLNHFDNSVTP 76


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 287 NICVYRKFVKCLN 249
           N C Y ++ KCLN
Sbjct: 136 NRCQYCRYQKCLN 148


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 152 TMNQPNLNTYKSRLTP 199
           ++NQP LN + + +TP
Sbjct: 61  SINQPYLNHFDNSVTP 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,884
Number of Sequences: 336
Number of extensions: 1811
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)