Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A03f
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.13 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.91 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 313 FSVSFISNDNYFTYN*FHSSLKII 242
           +++SFI N   F YN FHS+L ++
Sbjct: 133 YTLSFIENYCQFLYNCFHSTLLLM 156


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 293 RNKTDREENAHRNSLKTLS 349
           RN TDR+EN  R  + TL+
Sbjct: 25  RNNTDRDENLARVEVATLA 43


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 310 SVSFISNDNYFTYN*FHSS 254
           SV   S+DNY +++ F+SS
Sbjct: 468 SVQTESSDNYNSFHQFYSS 486


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 310 SVSFISNDNYFTYN*FHSS 254
           SV   S+DNY +++ F+SS
Sbjct: 416 SVQTESSDNYNSFHQFYSS 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,005
Number of Sequences: 336
Number of extensions: 2348
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)