Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A03f
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    28   8.4  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    28   8.4  

>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
           protein protein.
          Length = 3429

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 206 PSNRNALVLHGRNNFQRTVELIVRKII-IVRNKTDREENAHRNS 334
           P+N+N  +LH  NN +    L    I+  +  K   EEN H N+
Sbjct: 443 PANQNVFILHWLNNKEMHFTLQAEAILQELTKKVIDEENGHGNA 486


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
           protein.
          Length = 3419

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 206 PSNRNALVLHGRNNFQRTVELIVRKII-IVRNKTDREENAHRNS 334
           P+N+N  +LH  NN +    L    I+  +  K   EEN H N+
Sbjct: 436 PANQNVFILHWLNNKEMHFTLQAEAILQELTKKVIDEENGHGNA 479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,113,069
Number of Sequences: 53049
Number of extensions: 402086
Number of successful extensions: 743
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)