Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308A01f
         (307 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57484-1|CAA40722.1|  264|Drosophila melanogaster tra-2 protein.       27   6.0  
M76381-1|AAA69686.1|  136|Drosophila melanogaster transformer-2 ...    27   6.0  
M30939-3|AAA28955.1|  226|Drosophila melanogaster transformer-2 ...    27   6.0  
M30939-2|AAA28957.1|  136|Drosophila melanogaster transformer-2 ...    27   6.0  
M30939-1|AAA28954.1|  264|Drosophila melanogaster transformer-2 ...    27   6.0  
M23633-1|AAA28953.1|  264|Drosophila melanogaster protein ( D.me...    27   6.0  
J03155-1|AAA62771.1|  256|Drosophila melanogaster transformer-2 ...    27   6.0  
AY058768-1|AAL13997.1|  264|Drosophila melanogaster SD04329p pro...    27   6.0  
AE013599-1918|AAM68560.1|  136|Drosophila melanogaster CG10128-P...    27   6.0  
AE013599-1916|AAM68558.1|  226|Drosophila melanogaster CG10128-P...    27   6.0  
AE013599-1915|AAM68557.1|  226|Drosophila melanogaster CG10128-P...    27   6.0  
AE013599-1914|AAS64911.1|  264|Drosophila melanogaster CG10128-P...    27   6.0  
AE013599-1913|AAS64910.1|  264|Drosophila melanogaster CG10128-P...    27   6.0  
AE013599-1912|AAF58232.2|  264|Drosophila melanogaster CG10128-P...    27   6.0  
AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA...    26   7.9  

>X57484-1|CAA40722.1|  264|Drosophila melanogaster tra-2 protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>M76381-1|AAA69686.1|  136|Drosophila melanogaster transformer-2
           protein D protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>M30939-3|AAA28955.1|  226|Drosophila melanogaster transformer-2
          protein B protein.
          Length = 226

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74 SFATTSPPEPRSLIGRVRREQERL 3
          S + + PPEPR   GR  R++ER+
Sbjct: 25 SSSESPPPEPRHRSGRSSRDRERM 48


>M30939-2|AAA28957.1|  136|Drosophila melanogaster transformer-2
           protein D protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>M30939-1|AAA28954.1|  264|Drosophila melanogaster transformer-2
           protein A protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>M23633-1|AAA28953.1|  264|Drosophila melanogaster protein (
           D.melanogaster transformer-2 (tra-2) protein mRNA,
           complete cds. ).
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>J03155-1|AAA62771.1|  256|Drosophila melanogaster transformer-2
           protein.
          Length = 256

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 55  SSSESPPPEPRHRSGRSSRDRERM 78


>AY058768-1|AAL13997.1|  264|Drosophila melanogaster SD04329p
           protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>AE013599-1918|AAM68560.1|  136|Drosophila melanogaster CG10128-PB,
           isoform B protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>AE013599-1916|AAM68558.1|  226|Drosophila melanogaster
          CG10128-PD, isoform D protein.
          Length = 226

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74 SFATTSPPEPRSLIGRVRREQERL 3
          S + + PPEPR   GR  R++ER+
Sbjct: 25 SSSESPPPEPRHRSGRSSRDRERM 48


>AE013599-1915|AAM68557.1|  226|Drosophila melanogaster
          CG10128-PC, isoform C protein.
          Length = 226

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74 SFATTSPPEPRSLIGRVRREQERL 3
          S + + PPEPR   GR  R++ER+
Sbjct: 25 SSSESPPPEPRHRSGRSSRDRERM 48


>AE013599-1914|AAS64911.1|  264|Drosophila melanogaster CG10128-PG,
           isoform G protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>AE013599-1913|AAS64910.1|  264|Drosophila melanogaster CG10128-PF,
           isoform F protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>AE013599-1912|AAF58232.2|  264|Drosophila melanogaster CG10128-PA,
           isoform A protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 74  SFATTSPPEPRSLIGRVRREQERL 3
           S + + PPEPR   GR  R++ER+
Sbjct: 63  SSSESPPPEPRHRSGRSSRDRERM 86


>AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA
           protein.
          Length = 742

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 37  NERGSGGDVVAKEPKTQPSGSIDRNL 114
           N  G+GG V +K PK QP  SI R++
Sbjct: 17  NTNGNGGSVPSK-PKIQPKYSIHRDV 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,108,164
Number of Sequences: 53049
Number of extensions: 189971
Number of successful extensions: 598
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)