Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307H11f
(483 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 165 3e-40
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 150 1e-35
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 147 1e-34
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 142 3e-33
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 139 3e-32
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 130 1e-29
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 130 2e-29
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 126 3e-28
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 118 9e-26
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 117 1e-25
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 116 3e-25
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 114 1e-24
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 108 7e-23
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 107 1e-22
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 106 3e-22
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 105 5e-22
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 104 1e-21
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 102 4e-21
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 101 8e-21
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 99 3e-20
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 96 4e-19
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 95 1e-18
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 93 3e-18
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 92 5e-18
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 91 1e-17
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 85 8e-16
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 83 4e-15
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 80 3e-14
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 74 1e-12
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 71 1e-11
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 66 5e-10
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 56 4e-07
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 47 2e-04
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_A5N3U5 Cluster: Predicted hydrolase; n=1; Clostridium k... 33 3.4
UniRef50_A3J4T9 Cluster: Lysyl-tRNA synthetase; n=1; Flavobacter... 32 5.9
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 32 7.8
UniRef50_Q4YX19 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 165 bits (402), Expect = 3e-40
Identities = 77/124 (62%), Positives = 96/124 (77%)
Frame = +1
Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 469 RILT 480
R LT
Sbjct: 121 RKLT 124
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 150 bits (364), Expect = 1e-35
Identities = 65/120 (54%), Positives = 90/120 (75%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
Y+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T
Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 147 bits (356), Expect = 1e-34
Identities = 69/117 (58%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
Frame = +1
Query: 133 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 312
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 313 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 480
P GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 70 PTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 142 bits (345), Expect = 3e-33
Identities = 69/124 (55%), Positives = 89/124 (71%)
Frame = +1
Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
LRH+YIR P G+ + K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GG
Sbjct: 61 LRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGG 119
Query: 469 RILT 480
R LT
Sbjct: 120 RSLT 123
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 139 bits (337), Expect = 3e-32
Identities = 63/121 (52%), Positives = 84/121 (69%)
Frame = +1
Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSLE + ++EK +GG
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGG 120
Query: 469 R 471
R
Sbjct: 121 R 121
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 130 bits (315), Expect = 1e-29
Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 20/140 (14%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 240
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 241 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 420
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R L
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNIL 127
Query: 421 QSLEALKLVEKVQDGGRILT 480
Q L+ + +++ GGR++T
Sbjct: 128 QQLQKMGIIDVDPKGGRLIT 147
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 130 bits (313), Expect = 2e-29
Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 4/128 (3%)
Frame = +1
Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----V 456
R +Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +K+VEK V
Sbjct: 70 ARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGV 129
Query: 457 QDGGRILT 480
GGR +T
Sbjct: 130 NKGGRKIT 137
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 126 bits (304), Expect = 3e-28
Identities = 58/120 (48%), Positives = 79/120 (65%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
YIR +G KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T
Sbjct: 72 YIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRIT 131
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 118 bits (283), Expect = 9e-26
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = +1
Query: 115 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 294
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 295 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGR 471
H+Y GV + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR
Sbjct: 85 HLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGR 144
Query: 472 ILT 480
L+
Sbjct: 145 RLS 147
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 117 bits (282), Expect = 1e-25
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = +1
Query: 115 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 294
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 295 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGR 471
+YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGR 124
Query: 472 ILT 480
+T
Sbjct: 125 TIT 127
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 116 bits (279), Expect = 3e-25
Identities = 57/120 (47%), Positives = 74/120 (61%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
YI PVG++ + +GGRK G P F ++ GSI RKALQ LEA +EKV GR++T
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVT 122
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 114 bits (274), Expect = 1e-24
Identities = 56/120 (46%), Positives = 77/120 (64%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE L+++ ++ GR++T
Sbjct: 63 YIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVIT 121
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 108 bits (259), Expect = 7e-23
Identities = 52/119 (43%), Positives = 73/119 (61%)
Frame = +1
Query: 124 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 303
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 304 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
+ + +GV + + +G + PSH SG + R LQ LE + +V K+Q GR LT
Sbjct: 67 LNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLT 124
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 107 bits (258), Expect = 1e-22
Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Frame = +1
Query: 82 SKITIYVCKMRSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPY 252
S + Y +++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P
Sbjct: 63 SPVRAYGKSHQNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQ 122
Query: 253 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 432
D DW+YVR AA+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE
Sbjct: 123 DSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLE 182
Query: 433 ALKLVEKVQD-GGRILT 480
+ ++E ++ GGR +T
Sbjct: 183 KIGVLEYDEEKGGRRIT 199
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 106 bits (254), Expect = 3e-22
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRI 474
Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LEA L+ + G ++
Sbjct: 63 YVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLIVHDKTGRKV 120
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 105 bits (252), Expect = 5e-22
Identities = 52/116 (44%), Positives = 72/116 (62%)
Frame = +1
Query: 133 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 312
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 313 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
PVGV + +GGR+ G P F + SG+I RK LQ LE LVEK ++ GR++T
Sbjct: 67 PVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVT 121
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 104 bits (249), Expect = 1e-21
Identities = 52/125 (41%), Positives = 74/125 (59%)
Frame = +1
Query: 106 KMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAA 285
K + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA
Sbjct: 25 KRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAA 84
Query: 286 ILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG 465
+LR IY+R VG ++K FG +K G P H SS A +SL L LVE
Sbjct: 85 VLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQS 144
Query: 466 GRILT 480
G+ LT
Sbjct: 145 GQRLT 149
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 102 bits (245), Expect = 4e-21
Identities = 50/110 (45%), Positives = 70/110 (63%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE 450
Y+R VGV ++K +G ++RNG +H +S I R L L++L LVE
Sbjct: 78 YVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVE 127
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 101 bits (242), Expect = 8e-21
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +1
Query: 115 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 294
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 295 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GR 471
H+Y G+ + +++ RKR G P+H C +SG I R +Q LEA +EK +D GR
Sbjct: 85 HLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGR 144
Query: 472 ILT 480
L+
Sbjct: 145 RLS 147
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 99 bits (238), Expect = 3e-20
Identities = 53/120 (44%), Positives = 71/120 (59%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
YI PVG++ + +GGRKR G P F + SG+I R AL LE L V+K ++ GR++T
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVT 119
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 95.9 bits (228), Expect = 4e-19
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 118 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 294
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 295 HIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGR 471
+Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV GR
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGR 121
Query: 472 ILT 480
++
Sbjct: 122 TIS 124
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 94.7 bits (225), Expect = 1e-18
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Frame = +1
Query: 94 IYVCKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYV 273
I++ TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YV
Sbjct: 48 IFLMSAPFYTVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYV 107
Query: 274 RCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK 453
R AA+ R IY+R GV +T +FG NG S SG + R LQ LE +K+++K
Sbjct: 108 RAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKK 163
Query: 454 -----VQDGGRILT 480
++ G RI+T
Sbjct: 164 DNKSLLKKGSRIVT 177
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 93.1 bits (221), Expect = 3e-18
Identities = 45/111 (40%), Positives = 63/111 (56%)
Frame = +1
Query: 121 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 300
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 301 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK 453
Y++ G+ T+ IFG K G + G I R AL+SLE LK++ K
Sbjct: 69 YLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRK 119
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 92.3 bits (219), Expect = 5e-18
Identities = 54/113 (47%), Positives = 67/113 (59%)
Frame = +1
Query: 139 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 318
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH------- 208
Query: 319 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 477
V PSHF R S S A + LQ+LE LK+VEK QDGGR L
Sbjct: 209 ---------------RVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKL 246
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = +1
Query: 124 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 303
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 304 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILT 480
I +GV + + F ++R GV P+H +SG I R LQ LE + VE+ + GR LT
Sbjct: 110 IHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIGYVEQNPKKKGRRLT 169
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 85.0 bits (201), Expect = 8e-16
Identities = 42/119 (35%), Positives = 67/119 (56%)
Frame = +1
Query: 124 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 303
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 304 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
+ P+G+ + K +GG K +G +H + G+I R A+ LE L +EKV+ GRI++
Sbjct: 63 LHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVS 121
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 82.6 bits (195), Expect = 4e-15
Identities = 43/116 (37%), Positives = 61/116 (52%)
Frame = +1
Query: 118 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 297
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 298 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG 465
+YI +G+ ++ +GG+ G H S SI R LE+ LV+K Q G
Sbjct: 62 LYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQKG 117
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 79.8 bits (188), Expect = 3e-14
Identities = 41/118 (34%), Positives = 64/118 (54%)
Frame = +1
Query: 127 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 306
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 307 RSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
+ + +G + P H +S + R LQ LE LV +V + GR LT
Sbjct: 74 HHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLT 130
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 74.1 bits (174), Expect = 1e-12
Identities = 36/113 (31%), Positives = 64/113 (56%)
Frame = +1
Query: 142 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 321
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 322 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 480
+ + +GG K G ++ ++ G+I R A+ LE L +EK+ GRI++
Sbjct: 63 INGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVS 115
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 70.9 bits (166), Expect = 1e-11
Identities = 31/114 (27%), Positives = 66/114 (57%)
Frame = +1
Query: 124 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 303
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 304 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG 465
I +G + + +I+ G+K+ S SG I R +++ LE +K+++K + G
Sbjct: 65 IYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESG 116
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 65.7 bits (153), Expect = 5e-10
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Frame = +1
Query: 118 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 297
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 298 IYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG 465
+ P+G++ + +G +KR V P S + R +LQ+LE LV
Sbjct: 72 VAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQALEEDGLVTTAAGE 131
Query: 466 GR 471
GR
Sbjct: 132 GR 133
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 56.0 bits (129), Expect = 4e-07
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +1
Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKT-ARFKELAPYDPDWFYVRCAA 285
M VTVKDV Q + V+ +AA LKK+ VK+ EL P + C +
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSPNGWTQSSWPNVKSLPHTHELLPQ-----HSNCTS 55
Query: 286 IL---RHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 441
++ + + + P T + GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 56 VVVRGKGVGMLVPRPRSTEDR---GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/126 (24%), Positives = 57/126 (45%)
Frame = -1
Query: 480 CENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDSLYSNR*ANV 301
C+ A +L + Q LQ L+ A +T AE+ ++++ DLG + V
Sbjct: 34 CQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHGANPSATPEV 93
Query: 300 NMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNNLVLFNILYC 121
+ + GS++ +EP+ ++ S+LF L +H F S + L+L ++ Y
Sbjct: 94 QVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGCQSSDELLLVHVFYS 153
Query: 120 DGTHLA 103
+ H A
Sbjct: 154 NSRHRA 159
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 338 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 436
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A5N3U5 Cluster: Predicted hydrolase; n=1; Clostridium
kluyveri DSM 555|Rep: Predicted hydrolase - Clostridium
kluyveri DSM 555
Length = 339
Score = 33.1 bits (72), Expect = 3.4
Identities = 31/147 (21%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = +1
Query: 4 KVCNFACPHGYSLNIRNIPLQ*NFLNSKITIYVCKMRSVTV-KDVEQDKIVK-TVAAHLK 177
K+CN P GY +IRN+ ++ I + +M ++ V KD + D K V +H+
Sbjct: 5 KLCNSTGPSGYEEHIRNV-IRDELSTFTDNILIDRMGNIIVHKDRQNDSSSKIMVISHID 63
Query: 178 KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRK 357
++G + + D T +F L D + + A ++ I +G+K + +
Sbjct: 64 ESGLIITAYNKD--GTLKFSTLGDIDKNSLPAK-AVLIGDKKIPGVIGMKPIHIQSKKER 120
Query: 358 RNGVTPSHFCRSSGSIARKALQSLEAL 438
++ + C G+ +++ + + +L
Sbjct: 121 DENISYENMCIDIGAFSQEECRRIISL 147
>UniRef50_A3J4T9 Cluster: Lysyl-tRNA synthetase; n=1; Flavobacteria
bacterium BAL38|Rep: Lysyl-tRNA synthetase -
Flavobacteria bacterium BAL38
Length = 509
Score = 32.3 bits (70), Expect = 5.9
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +1
Query: 76 LNSKITIYVCKMRSVTVKDVEQDKIVKT-----VAAHLKKTGKVKVPEHMDLVKTARFKE 240
LN K+T+YV VK +E + T + H+ G + + +DL K +K
Sbjct: 181 LNEKVTLYVLDTNFKIVKSIEHEFAFTTKQSFNIDVHVSNNGNLAIVRELDLPKMKPYKS 240
Query: 241 LAPYD 255
L +D
Sbjct: 241 LFYWD 245
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 31.9 bits (69), Expect = 7.8
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 208 MDLVKTARFKELAPYDPDWF-YVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 378
+DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+
Sbjct: 590 VDLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPN 647
>UniRef50_Q4YX19 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 86
Score = 31.9 bits (69), Expect = 7.8
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 37 SLNIRNIPLQ*NFLNSKITIYVCKMRSVTVKDVEQDKIVKTVAAHLKKTGKV 192
++N+RNI N KI IY+C R+ VKD + I++ + LK + +V
Sbjct: 6 NVNLRNIKQLGNAEFKKIIIYICMTRNNIVKDQKYVDILQKMDLILKNSNQV 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,005,684
Number of Sequences: 1657284
Number of extensions: 8874620
Number of successful extensions: 22293
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 21580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22283
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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