Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307H11f
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   190   9e-49
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   190   9e-49
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   190   9e-49
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   190   9e-49
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   190   9e-49
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   190   1e-48
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   157   1e-38
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   157   1e-38
AY069598-1|AAL39743.1|  353|Drosophila melanogaster LD35209p pro...    28   5.8  
AE014298-2614|AAF48768.2|  353|Drosophila melanogaster CG8142-PA...    28   5.8  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  190 bits (463), Expect = 9e-49
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  190 bits (463), Expect = 9e-49
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  190 bits (463), Expect = 9e-49
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  190 bits (463), Expect = 9e-49
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  190 bits (463), Expect = 9e-49
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  190 bits (462), Expect = 1e-48
 Identities = 85/124 (68%), Positives = 103/124 (83%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVKD++Q  + K VA  LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 469 RILT 480
           R L+
Sbjct: 121 RKLS 124


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  157 bits (380), Expect = 1e-38
 Identities = 72/124 (58%), Positives = 90/124 (72%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVK+++Q  + K +AA LKK+GK+ VPE    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 469 RILT 480
           R LT
Sbjct: 121 RKLT 124


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  157 bits (380), Expect = 1e-38
 Identities = 72/124 (58%), Positives = 90/124 (72%)
 Frame = +1

Query: 109 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 288
           M  VTVK+++Q  + K +AA LKK+GK+ VPE    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 289 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 468
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 469 RILT 480
           R LT
Sbjct: 121 RKLT 124


>AY069598-1|AAL39743.1|  353|Drosophila melanogaster LD35209p
           protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
 Frame = +1

Query: 97  YVCKMRSVTVKDVEQDKIVKTVAAHLKKT-------GKVKVPEHMDLVKTARFKELAPYD 255
           Y+C+M  V ++D     IVK     L++         ++K PEH  ++ TA   E++   
Sbjct: 204 YICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGPEH--IINTADLFEMSGVI 261

Query: 256 PDWF 267
           P+++
Sbjct: 262 PEYY 265


>AE014298-2614|AAF48768.2|  353|Drosophila melanogaster CG8142-PA
           protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
 Frame = +1

Query: 97  YVCKMRSVTVKDVEQDKIVKTVAAHLKKT-------GKVKVPEHMDLVKTARFKELAPYD 255
           Y+C+M  V ++D     IVK     L++         ++K PEH  ++ TA   E++   
Sbjct: 204 YICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGPEH--IINTADLFEMSGVI 261

Query: 256 PDWF 267
           P+++
Sbjct: 262 PEYY 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,857,737
Number of Sequences: 53049
Number of extensions: 440698
Number of successful extensions: 1201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)