Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307H10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.23 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -3

Query: 390 LLQIIFVN*HFTKIFNIYLLFKFRF*CSPCCLLSHGYNIKEFI 262
           LLQ++FV  +F  +F +Y ++   +      +++ GY + +F+
Sbjct: 140 LLQLVFVFCYFIYLFTVYYIY---YSVHEASIINFGYTLAKFM 179



 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 297 LLSHGYNIKEFINNKYYSLL 238
           L +  YN KE   N Y SLL
Sbjct: 122 LYTINYNFKESERNDYVSLL 141


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 326 LNSRYMLNIFVKC*LTKIIC 385
           LN+R M+N +  C L+K  C
Sbjct: 34  LNNRRMVNYYAACLLSKGPC 53


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 320  VFNVRPVAYYHMATTLRNSL 261
            VF +RP   YH+     N +
Sbjct: 958  VFTLRPATTYHIRIVAENEI 977


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +2

Query: 392 LESSNAFSKIDLNTNQNVSNVCLVSNDV 475
           L+  +++++IDL+  +NV+N+  V+ D+
Sbjct: 69  LKILDSWNEIDLHGLENVANLKSVNPDL 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,516
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)