Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307H10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0111 + 9257161-9257931                                           27   9.1  
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916...    27   9.1  

>10_05_0111 + 9257161-9257931
          Length = 256

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -3

Query: 363 HFTKIFNIYLLFKFRF*CSPCCLLSHGYNIKEFINNKYYSLLDDITKLIWH 211
           HFT    I+ L        PC +   G+ ++  ++ KY+S+    +   WH
Sbjct: 112 HFTLFRRIFFLKPQPNKSKPCVVGGAGFQLRGTLSQKYFSMPFKTSNKGWH 162


>06_01_1113 -
           9164953-9165044,9166453-9166586,9166624-9166734,
           9166815-9167066,9167152-9168186,9168313-9169187,
           9169476-9169673
          Length = 898

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 94  HYDRKTFFSLILVLRIHLPS 35
           HYD++TF   + +L + +PS
Sbjct: 809 HYDKETFMEFLTILNLSIPS 828


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,504,316
Number of Sequences: 37544
Number of extensions: 198924
Number of successful extensions: 397
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)