Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307H10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical pr...    30   0.87 

>Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical
           protein T10H4.5 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = -3

Query: 456 QTLETF*FVFKSILEKAFELSRLLQIIFVN*HFTKIFNIYLLFKFRF*CSPCCLLSHGYN 277
           +TL  F F   + ++K  +    + I+ +   F  ++     F+  F   P  L+   YN
Sbjct: 142 RTLSVF-FPMSNWIQKLAKAKTAILIVLIMFTFWILYYSSPYFEMEFRWYPDILIKSCYN 200

Query: 276 IKEFINNKYYSLL 238
            KE +N+ YY L+
Sbjct: 201 YKEHLNHTYYVLV 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,035,921
Number of Sequences: 27780
Number of extensions: 214356
Number of successful extensions: 427
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)