Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307H10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   3.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   4.4  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   5.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 320 VFNVRPVAYYHMATTLRNSL 261
           VFN+RP   YH+     N +
Sbjct: 939 VFNLRPATTYHLRIVAENEI 958


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 120 SSDHTASRALYRNHCKEKV*LEIIDVLKTFCAK 218
           +S  T S ALY     + V  ++ + + TFC K
Sbjct: 308 TSSTTMSNALYELALNQDVQKKLREEINTFCPK 340


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDITKL 220
           LS+ YN   + NN Y  L  +I  +
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINHI 109


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDI 229
           LS+ YN   + NN Y  L  +I
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNI 106


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDI 229
           LS+ YN   + NN Y  L  +I
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNI 106


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDI 229
           LS+ YN   + NN Y  L  +I
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNI 106


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDI 229
           LS+ YN   + NN Y  L  +I
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNI 106


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 LSHGYNIKEFINNKYYSLLDDI 229
           LS+ YN   + NN Y  L  +I
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNI 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,000
Number of Sequences: 438
Number of extensions: 2569
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)