Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307H09f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 41 6e-04
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 41 6e-04
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 41 6e-04
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 41 6e-04
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 41 6e-04
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 41 6e-04
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 41 6e-04
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 41 6e-04
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 40 8e-04
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 39 0.002
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 39 0.002
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 39 0.002
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 38 0.003
At4g15840.1 68417.m02409 expressed protein 29 1.4
At2g21300.1 68415.m02535 kinesin motor family protein contains P... 27 5.8
At5g07790.1 68418.m00892 expressed protein 27 7.7
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 27 7.7
At4g23250.1 68417.m03352 protein kinase family protein contains ... 27 7.7
At4g16141.1 68417.m02446 expressed protein contains 1 predicted ... 27 7.7
At4g03610.1 68417.m00496 phosphonate metabolism protein-related ... 27 7.7
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 424 LVPNSARGKTTILYQLLLGEAVHTRPTIGSNV 519
+V A GKTTILY+L LGE V T PTIG NV
Sbjct: 22 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 445 GKTTILYQLLLGEAVHTRPTIGSNV 519
GKTT LY+L LGE V T PT+GSNV
Sbjct: 29 GKTTTLYKLHLGEVVTTHPTVGSNV 53
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 445 GKTTILYQLLLGEAVHTRPTIGSNV 519
GKTTILY+L +GE V T PTIG NV
Sbjct: 29 GKTTILYRLQMGEVVSTIPTIGFNV 53
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 439 ARGKTTILYQLLLGEAVHTRPTIGSNV 519
A GKTTILY+L +GE + T PTIG NV
Sbjct: 27 AAGKTTILYKLHIGEVLSTVPTIGFNV 53
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 439 ARGKTTILYQLLLGEAVHTRPTIGSNV 519
A GKTTILY+L +GE + T PTIG NV
Sbjct: 27 AAGKTTILYKLHIGEVLSTVPTIGFNV 53
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 445 GKTTILYQLLLGEAVHTRPTIGSNV 519
GKTTILY+L LGE V T PTIG N+
Sbjct: 29 GKTTILYKLKLGEVVTTVPTIGFNL 53
>At4g15840.1 68417.m02409 expressed protein
Length = 660
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 146 ISGSRARFQLSGNSGRKHSRCCTSILRKFSG 238
+SGS FQ S NS R CTS++ K G
Sbjct: 115 VSGSNLVFQQSSNSQTNFGRPCTSVVDKTEG 145
>At2g21300.1 68415.m02535 kinesin motor family protein contains Pfam
profile: kinesin motor domain PF00225
Length = 862
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 56 KLKEHGASSCISGKRGRRCCNIWHWGSVDSISG 154
K+ EH ASS R N W GSV ISG
Sbjct: 425 KMVEHDASSKAGTPHFRNRTNKWEDGSVSEISG 457
>At5g07790.1 68418.m00892 expressed protein
Length = 616
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 77 SSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSI 220
S + KR RR + G+ +S + A +S SGR+ + C TS+
Sbjct: 411 SGRVKRKRSRRISLVAE-GNYQQVSAAEAIVDISRKSGRETAACITSL 457
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 402 VKKKKKNPRAEFGTRQNHYFIPTTS 476
+ +KK R +FG Q HY PT+S
Sbjct: 155 ILRKKNLDRGDFGLLQPHYLRPTSS 179
>At4g23250.1 68417.m03352 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 998
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 441 CRIRHEGFFFFFLHRIDKFIKNLNAF*FQI 352
C IR+ FF L + F KN NA FQ+
Sbjct: 785 CMIRYSNRSFFGLLEMTPFFKNYNATDFQV 814
>At4g16141.1 68417.m02446 expressed protein contains 1 predicted
transmembrane domain; contains a partial Pfam PF00320:
GATA zinc finger profile
Length = 226
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 352 KTEKVRSWSDVENG*CLASPHGVGATMAAAVNCDT 248
K E SDV+NG C +S G G T V+C T
Sbjct: 11 KLESAGDSSDVDNGNCSSSGSG-GDTKKTCVDCGT 44
>At4g03610.1 68417.m00496 phosphonate metabolism protein-related
weak similarity to PhnP protein. (Swiss-Prot:P16692)
[Escherichia coli]
Length = 290
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -3
Query: 150 LMESTDPQCHILQHRRPRLPLMQLEAPCS----FNFCSLRAIRRYKSYYVD*G 4
L++ +DP CH+ LP + C+ ++CS R+K +D G
Sbjct: 30 LLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSKEEDGRHKYILIDVG 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,233,628
Number of Sequences: 28952
Number of extensions: 219393
Number of successful extensions: 484
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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