BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS307H08f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 28 6.7 BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro... 28 6.7 AY089397-1|AAL90135.1| 215|Drosophila melanogaster AT22194p pro... 28 6.7 AE014297-2647|AAF55655.1| 215|Drosophila melanogaster CG5217-PA... 28 6.7 AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA... 28 6.7 AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p pro... 28 8.8 AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA... 28 8.8 >X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Drosophila melanogastertransposable element 297. ). Length = 1059 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -2 Query: 511 YVKIIY--RNYNLALKLGSTTNPSNERI 434 Y+KI+Y R+Y L GST N NE I Sbjct: 15 YIKIVYKGRSYKCLLDTGSTINMINENI 42 >BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p protein. Length = 2727 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 422 WCRQAY*TRQLEVHYLVGEQQSVLQD 345 W Q+ T QL++H G Q +VLQD Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835 >AY089397-1|AAL90135.1| 215|Drosophila melanogaster AT22194p protein. Length = 215 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1 Query: 374 VGEQQSVLQDPQH*VQPVLEDEYDDLQ 294 V E Q V QDP QP ++DE+D+++ Sbjct: 144 VHELQPVSQDPDTDPQPTVKDEHDEME 170 >AE014297-2647|AAF55655.1| 215|Drosophila melanogaster CG5217-PA protein. Length = 215 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1 Query: 374 VGEQQSVLQDPQH*VQPVLEDEYDDLQ 294 V E Q V QDP QP ++DE+D+++ Sbjct: 144 VHELQPVSQDPDTDPQPTVKDEHDEME 170 >AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA protein. Length = 2727 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 422 WCRQAY*TRQLEVHYLVGEQQSVLQD 345 W Q+ T QL++H G Q +VLQD Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835 >AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p protein. Length = 463 Score = 27.9 bits (59), Expect = 8.8 Identities = 10/35 (28%), Positives = 22/35 (62%) Frame = -2 Query: 448 SNERIAYGDGVDKHTELVSWKFITLWENNRVYFKI 344 +NE Y + V++ T L+SW+F++++ + F + Sbjct: 150 ANESTPYAEAVNECTALLSWRFMSVYLQVELLFTL 184 >AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA protein. Length = 463 Score = 27.9 bits (59), Expect = 8.8 Identities = 10/35 (28%), Positives = 22/35 (62%) Frame = -2 Query: 448 SNERIAYGDGVDKHTELVSWKFITLWENNRVYFKI 344 +NE Y + V++ T L+SW+F++++ + F + Sbjct: 150 ANESTPYAEAVNECTALLSWRFMSVYLQVELLFTL 184 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,983,389 Number of Sequences: 53049 Number of extensions: 398111 Number of successful extensions: 1402 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1402 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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