Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307H04f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p pro... 108 4e-24
AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA... 108 4e-24
BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p pro... 33 0.23
AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA ... 33 0.23
AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p pro... 33 0.31
AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA... 33 0.31
AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-P... 29 5.1
X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase... 28 6.7
AY118486-1|AAM49855.1| 174|Drosophila melanogaster HL08104p pro... 28 6.7
AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p pro... 28 6.7
AL133506-1|CAB65846.1| 387|Drosophila melanogaster EG:BACN33B1.... 28 6.7
AE014298-465|AAS65258.1| 387|Drosophila melanogaster CG32795-PC... 28 6.7
AE014298-464|AAF45824.2| 387|Drosophila melanogaster CG32795-PB... 28 6.7
AE014298-463|AAF45825.2| 387|Drosophila melanogaster CG32795-PA... 28 6.7
AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA... 28 6.7
>AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p
protein.
Length = 280
Score = 108 bits (260), Expect = 4e-24
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Frame = +1
Query: 70 CILLASVAIATSYSIKDNEIELPRLRTSDDLLDSVISDCSEAGSPMACLKVKVLSYLDNK 249
C LL + + S + +N + PR+ +SD+L+ +++ C A + M CLK KVL+YLD
Sbjct: 13 CALLLVASTSVSGAAIENAVT-PRIHSSDELISTIVDKCFHANA-MHCLKEKVLTYLDTV 70
Query: 250 VGVGSE-TGRALDETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRGFDIEF 426
V E +GRAL + IDKVI DR+ RIL+TNE + +LP+ F + V+YR+DRGFD+E
Sbjct: 71 ANVEEEVSGRALGDDVIDKVIVDRLGRILNTNEMRLQLPQTFFAGSVVTYRSDRGFDLEL 130
Query: 427 PENNENGEAR 456
P++ E +
Sbjct: 131 PKDEGRAEKK 140
>AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA
protein.
Length = 280
Score = 108 bits (260), Expect = 4e-24
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Frame = +1
Query: 70 CILLASVAIATSYSIKDNEIELPRLRTSDDLLDSVISDCSEAGSPMACLKVKVLSYLDNK 249
C LL + + S + +N + PR+ +SD+L+ +++ C A + M CLK KVL+YLD
Sbjct: 13 CALLLVASTSVSGAAIENAVT-PRIHSSDELISTIVDKCFHANA-MHCLKEKVLTYLDTV 70
Query: 250 VGVGSE-TGRALDETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRGFDIEF 426
V E +GRAL + IDKVI DR+ RIL+TNE + +LP+ F + V+YR+DRGFD+E
Sbjct: 71 ANVEEEVSGRALGDDVIDKVIVDRLGRILNTNEMRLQLPQTFFAGSVVTYRSDRGFDLEL 130
Query: 427 PENNENGEAR 456
P++ E +
Sbjct: 131 PKDEGRAEKK 140
>BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p
protein.
Length = 288
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 154 DDLLDSVISDCSEAGSPMACLKVKVLSYLDNKVG 255
+D++DS+ SDC S ++C+K K+ S++D +G
Sbjct: 37 NDIMDSIYSDCLRKDS-VSCVKYKLFSFVDKVLG 69
>AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA
protein.
Length = 288
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 154 DDLLDSVISDCSEAGSPMACLKVKVLSYLDNKVG 255
+D++DS+ SDC S ++C+K K+ S++D +G
Sbjct: 37 NDIMDSIYSDCLRKDS-VSCVKYKLFSFVDKVLG 69
>AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p
protein.
Length = 233
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 286 ETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRG 411
E +D ++ +RVAR T+ +FK+P+ Q+ + + RG
Sbjct: 92 EAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEESRG 133
>AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA
protein.
Length = 233
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 286 ETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRG 411
E +D ++ +RVAR T+ +FK+P+ Q+ + + RG
Sbjct: 92 EAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEESRG 133
>AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-PA
protein.
Length = 1395
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +1
Query: 94 IATSYSIKDNEIELPRLRTSDDLLDSVISDCSEAGSPMACLKVKVLSYLDNKVGVGSETG 273
+ + YSI E P L SDD D+ DC A P K++ S ++
Sbjct: 696 VESEYSI---EQMAPELSDSDDTFDNSEEDCRSADEPSNSKKIRNSSLFGSESESDESEE 752
Query: 274 RALDETNI 297
RAL+ ++
Sbjct: 753 RALEADDL 760
>X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase
delta protein.
Length = 1092
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 269 RGGHWTRQTSTKSSMIGWRGFWTPTNSSLNCRSLCSK 379
+G H +T S + G GF T S L C+SL K
Sbjct: 970 KGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMPK 1006
>AY118486-1|AAM49855.1| 174|Drosophila melanogaster HL08104p
protein.
Length = 174
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 GYG-RVMICWTVLSVIVPKPDRPWHAS 217
GYG + WT+ + PD PWH S
Sbjct: 62 GYGYQAYNAWTLYKLAYSPPDAPWHVS 88
>AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p protein.
Length = 1092
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 269 RGGHWTRQTSTKSSMIGWRGFWTPTNSSLNCRSLCSK 379
+G H +T S + G GF T S L C+SL K
Sbjct: 970 KGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMPK 1006
>AL133506-1|CAB65846.1| 387|Drosophila melanogaster EG:BACN33B1.2
protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 GYG-RVMICWTVLSVIVPKPDRPWHAS 217
GYG + WT+ + PD PWH S
Sbjct: 275 GYGYQAYNAWTLYKLAYSPPDAPWHVS 301
>AE014298-465|AAS65258.1| 387|Drosophila melanogaster CG32795-PC,
isoform C protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 GYG-RVMICWTVLSVIVPKPDRPWHAS 217
GYG + WT+ + PD PWH S
Sbjct: 275 GYGYQAYNAWTLYKLAYSPPDAPWHVS 301
>AE014298-464|AAF45824.2| 387|Drosophila melanogaster CG32795-PB,
isoform B protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 GYG-RVMICWTVLSVIVPKPDRPWHAS 217
GYG + WT+ + PD PWH S
Sbjct: 275 GYGYQAYNAWTLYKLAYSPPDAPWHVS 301
>AE014298-463|AAF45825.2| 387|Drosophila melanogaster CG32795-PA,
isoform A protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 GYG-RVMICWTVLSVIVPKPDRPWHAS 217
GYG + WT+ + PD PWH S
Sbjct: 275 GYGYQAYNAWTLYKLAYSPPDAPWHVS 301
>AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA
protein.
Length = 1092
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 269 RGGHWTRQTSTKSSMIGWRGFWTPTNSSLNCRSLCSK 379
+G H +T S + G GF T S L C+SL K
Sbjct: 970 KGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMPK 1006
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,804,185
Number of Sequences: 53049
Number of extensions: 473285
Number of successful extensions: 1087
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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