Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307H04f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 3.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 5.8
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 52 ESEYGGVKDLRITPNKL 68
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 120 ESEYGGVKDLRITPNKL 136
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 414 ESPVGSVRDLRVLEHKL 364
ES G V+DLR+ +KL
Sbjct: 120 ESEYGGVKDLRITPNKL 136
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 411 SPVGSVRDLRVLEHKL 364
S G VRDLR+ H+L
Sbjct: 90 SDYGGVRDLRIPPHRL 105
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 469 SLRGHELHRSRCSQGIQYRIPCRLCKRP 386
SL+ H++ S CS Q + CK P
Sbjct: 46 SLKAHKVVLSACSSYFQKLLLSNPCKHP 73
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 268 FPILHRLCCPDMIELSL*GMPWAIRLR 188
FP+ ++ELSL PW+ R +
Sbjct: 905 FPVWQVTLNARLVELSLGSNPWSCRCK 931
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,911
Number of Sequences: 438
Number of extensions: 2644
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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