Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307H02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 1e-05
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.035
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.44
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.44
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.44
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.0
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 28 5.4
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 7.1
SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 27 9.4
SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 9.4
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 27 9.4
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +1
Query: 280 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 453
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG 207
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 280 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 453
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG 192
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 280 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 453
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG 75
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +1
Query: 262 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 441
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 442 LMRG 453
RG
Sbjct: 257 NERG 260
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 337 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 453
A+F D ++ PGFA F AA EE HA +++L RG
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG 40
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 262 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATK 426
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 280 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 420
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHA 420
+F D +N PGF K F A+ EE EHA
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHA 58
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 228 RHHQG*VAHHGADLLQHDEETDPGGSG 308
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 276 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 148
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 340 YFSIDTVNRPGFAKLFFDAATEEREHA 420
+F + + N+PG ++ FDAA + R ++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNS 164
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 279 DEETDPGGSGRVNPVLSHGGLLLDRYGEP 365
D DPGG R++ + HGG +DR G P
Sbjct: 226 DRPMDPGGP-RMDHPMGHGGPPMDRGGPP 253
>SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 504 VGGGPVRDEVGYGACQLAPHEQVVNELGRVLAFF 403
VG E GY AC +A + Q +N + +L F
Sbjct: 142 VGWSSYGPEPGYAACSIAWYRQDLNNMSYILCLF 175
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 394 AATEEREHATKLIDYLLMRG 453
A+ EEREHA KL + L RG
Sbjct: 3 ASHEEREHAEKLAKFQLQRG 22
>SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 780
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 358 VNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 483
+N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 4 INKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 43
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 189 GSNESEDSKENSPHLNF 139
GSNES+ +NS HLN+
Sbjct: 239 GSNESQQELQNSSHLNY 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,458
Number of Sequences: 59808
Number of extensions: 258597
Number of successful extensions: 619
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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