Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 285 RTYWSSKR 308
           RTYWS+KR
Sbjct: 215 RTYWSAKR 222


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 149 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 253
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 107


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 149 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 253
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 258


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 149 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 253
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 317


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 159 IWSSTSSTFPVW 124
           IW+ST   F VW
Sbjct: 344 IWNSTRRLFVVW 355


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 294 NRCGTSCCSSSGILCCFAIL 235
           N C ++ CS++G L C  ++
Sbjct: 300 NECLSNPCSNAGTLDCVQLV 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,675
Number of Sequences: 336
Number of extensions: 2034
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)