Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307G12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 35 0.034
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 33 0.18
05_01_0092 - 609537-609941,610067-610328,610624-610731,611083-61... 32 0.32
04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539 31 0.56
07_03_0072 - 13051145-13052362 31 0.74
11_04_0242 - 15273774-15274043,15274131-15274235 29 1.7
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 29 1.7
01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884... 29 1.7
06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507 29 2.3
07_03_0953 + 22860954-22861262 29 3.0
05_04_0410 + 21053952-21054014,21054127-21054160,21054267-21054448 29 3.0
02_02_0341 + 9141556-9142654,9143357-9143454 29 3.0
11_01_0538 + 4265540-4265896 28 4.0
04_03_0968 + 21328473-21328671,21328861-21328991 28 4.0
01_07_0360 + 43056226-43057566 28 4.0
07_03_0339 + 16941359-16941670,16941703-16942074 28 5.2
03_02_0534 - 9267297-9267734,9268376-9268649,9268782-9268889,926... 28 5.2
02_04_0413 + 22681957-22682035,22682253-22682788 28 5.2
08_02_0773 + 21043553-21043813,21044775-21045203 27 6.9
03_05_0808 - 27854798-27855112 27 6.9
01_03_0051 - 11985456-11985803 27 6.9
12_02_0967 - 24916352-24916402,24916662-24916717,24917602-249176... 27 9.1
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411... 27 9.1
01_05_0583 + 23420160-23420480 27 9.1
>03_02_0994 -
13067254-13067379,13067483-13067521,13067824-13067893,
13068025-13068116,13068237-13068319,13068590-13068633,
13068682-13068800,13068883-13068915,13069152-13069239,
13069364-13069413
Length = 247
Score = 35.1 bits (77), Expect = 0.034
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Frame = -3
Query: 363 RSPCCNSI--C--CSYSCTLRCTFCYSNRCGTSCCSSSGILCCFAILCWCCSNPASGSLH 196
R+PCCN + C C T+ C C + + C + G+ C C C
Sbjct: 28 RAPCCNDVFHCRHCHNESTVICLVCDTEQPVAQVCYNCGV-CMGEYFCSACKFFDDDVR- 85
Query: 195 SPCSCCIRCRLPIW-SSTSSTFPVWICTSVC 106
C CC+ C IW + +ST + C
Sbjct: 86 --CRCCLLCFCWIWLTGNTSTAKIAASAGSC 114
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -3
Query: 399 ESFDSSTGLRSCRSPCCNSICCSYSCTL---RCTFCYSNRCGTSCCSSSGILCCFAILCW 229
E FD + G S + CC +C +C+ RC CG C L CF
Sbjct: 741 EMFDKAVGCCSRLTDCCCCMCFINTCSKMNDRCAIVMVQLCGALSC-----LACFECCSL 795
Query: 228 CC 223
CC
Sbjct: 796 CC 797
>05_01_0092 -
609537-609941,610067-610328,610624-610731,611083-611204,
611295-611366,611531-611590,611692-611874
Length = 403
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = -3
Query: 339 CCSYSCTLRCTFCYSNRCGTSCCSSSGILCCFAILCWCCSN-PASGSLHSPCSCCIRCR 166
C S T C C+ C +C L CC N P +L P C CR
Sbjct: 267 CSEVSDTELCCICFDQACTIEVQDCGHQMCAPCTLALCCHNKPNPTTLTPPSPACPFCR 325
>04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539
Length = 585
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQE 280
RQRMQQ+Q R L LEQ Q A Q ++ L +QQ+
Sbjct: 477 RQRMQQQQALQRRQLF-LEQQQQQAALQQQLMLEQQQQ 513
>07_03_0072 - 13051145-13052362
Length = 405
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 303 KRCSVGCSYRSSKWSCNRGYGRSEGR 380
+ C G R S W C RGY RS+ R
Sbjct: 206 RACLAGTRPRCSAWQCRRGYWRSQRR 231
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 237 LCWCCSNPASGSLHSPCSCCIRCRLP 160
+C CC P + +PC I C +P
Sbjct: 78 VCTCCGGPHGVCIPAPCCYAINCNIP 103
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +2
Query: 74 ERPCVLFQSIEQTLVQIHTGNVLEVLDHMGSRQRMQQEQGECREPLAGLEQHQHSMAKQH 253
++P + Q ++Q Q+ N L H Q Q+Q + ++ L + QH +
Sbjct: 650 QQPPMQQQQLQQQQNQLQQQNQLHQ-QHQLQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQ 708
Query: 254 RMPLLEQQEVPH 289
+PL +QQ H
Sbjct: 709 GLPLQQQQSQGH 720
>01_06_0802 +
32087661-32087965,32088106-32088220,32088302-32088421,
32089678-32089788,32090084-32090122,32090965-32091069,
32091149-32091187,32091923-32092015
Length = 308
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -3
Query: 219 NPASGSLHSPCS--CCIRCRLPIWSSTSSTFPV 127
NP LH+P S RLP+W ST S PV
Sbjct: 32 NPPHRFLHAPSSPAAASPSRLPLWRSTGSLLPV 64
>06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507
Length = 111
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 165 AGSVCSRSRESVGSRWQDWSSTSIVWRSSIGCRYWSSKRCRTYWSSKRCSVGCSYRSSKW 344
A + S S + + Q + S++ I C+ S RC W + C+ C+ ++
Sbjct: 20 AAAASSSSHPQLVQQMQVKRARSLLQAPKIDCQGTCSGRCANNWKKEMCNKMCNVCCNRC 79
Query: 345 SC-NRGYGRSEGRCC 386
+C G G+ C
Sbjct: 80 NCVPPGSGQDTRHLC 94
>07_03_0953 + 22860954-22861262
Length = 102
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 267 WSSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGR 380
W R W +R S CS SS WS + G GR
Sbjct: 9 WMRMAGRQRWLKRRRSGACSRASSAWSRSGGCDTQNGR 46
>05_04_0410 + 21053952-21054014,21054127-21054160,21054267-21054448
Length = 92
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 309 CSVGCSYRSSKWSCNRGYGRSEGRCCYQRTQC----PAGDINLCSVWRNVLRYS 458
C C YR SK + R+ G CC QR C +G+ N+C + N+ ++
Sbjct: 34 CGAKCGYRCSKSGRPKMCLRACGTCC-QRCGCVPPGTSGNENVCPCYANMTTHN 86
>02_02_0341 + 9141556-9142654,9143357-9143454
Length = 398
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 159 WVAGSVCSRSRESVGSRWQDWSSTSIVWRSSIGCRYWSSKRCRTYWSSKRCSV 317
WV G C + + R +D + +++ S C +K T W CS+
Sbjct: 33 WVGGDHCHMFSKLLSIRCEDCPNLTVLLLPSFECSISDTKDINTIWFPNLCSL 85
>11_01_0538 + 4265540-4265896
Length = 118
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = -3
Query: 360 SPCCNSICCSYSCTLRCTFCYSNRCGTSCCSSSGILCCFAILCWCCSNPASGSLHSPCSC 181
SP C + C RC +R C +++G CC C P +G +C
Sbjct: 21 SPAFPGNCGADVCQFRCAVMGGDREKAYCDAATGRCCCPPGSATLC-RPLAGCRSRIPAC 79
Query: 180 CIRCR 166
I+C+
Sbjct: 80 RIKCK 84
>04_03_0968 + 21328473-21328671,21328861-21328991
Length = 109
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = -3
Query: 333 SYSCTLRCTFCYSNRCGTSCCSSSGILCCFAILCWCCSNPASGSLHSPC 187
S+S L C S +CCS L LC C +NP + C
Sbjct: 7 SFSLQLACAKSLSPLLVGACCSGQRQLAAGLRLCGCLTNPGYSLTKNVC 55
>01_07_0360 + 43056226-43057566
Length = 446
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -3
Query: 312 CTFCYSNRCG---TSCCSSSGILCCFAILCWCCSNPASGSLHSPCSCCIRCRLPI 157
C C+ C C C AI C NP + LH P C CR I
Sbjct: 317 CNICFEQACSMEVKECGHQMCAACTLAICCHSKPNPKTLLLHPP--ACPFCRTTI 369
>07_03_0339 + 16941359-16941670,16941703-16942074
Length = 227
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 267 WSSKRCRTYWSSKRCSVGCSYRSSKW 344
WS R W +RCS CS S W
Sbjct: 145 WSRMAGRRRWLKRRCSGACSRALSAW 170
>03_02_0534 -
9267297-9267734,9268376-9268649,9268782-9268889,
9269476-9269567,9269652-9269711,9269812-9269994
Length = 384
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/42 (23%), Positives = 15/42 (35%)
Frame = -3
Query: 312 CTFCYSNRCGTSCCSSSGILCCFAILCWCCSNPASGSLHSPC 187
C+ C+ C +C L CC S + +PC
Sbjct: 250 CSICFEQACTIEVRECGHQMCAACTLALCCHAKPSAAAATPC 291
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -3
Query: 360 SPCCNSICCSYSCTLRCTFCYSNRCGTSCCSSS 262
SPC + CC + C C CG C S
Sbjct: 100 SPCVHPPCCESAAGCCCNGCSGGGCGGGQCPPS 132
>08_02_0773 + 21043553-21043813,21044775-21045203
Length = 229
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 360 YGRSEGRCCYQRTQCPAGDINLCSVWRN 443
Y ++ CCY R+ PA D + +W N
Sbjct: 40 YCDTKQSCCYPRSGKPAADFGIHGLWPN 67
>03_05_0808 - 27854798-27855112
Length = 104
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 CRYWSSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGRCC-YQRTQCPAGDIN 422
C + K C+ Y + CSV C S+K C +C Y C A IN
Sbjct: 49 CDHACKKSCKGYGRNSDCSVPCGDPSNKAGCKSCLQAYYSKCLNYCGQACRAVCIN 104
>01_03_0051 - 11985456-11985803
Length = 115
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 267 WSSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGR 380
W R W +R + CS SS WS + G GR
Sbjct: 9 WMRMAGRRRWLKRRRTGACSRASSAWSRSGGCDAQNGR 46
>12_02_0967 -
24916352-24916402,24916662-24916717,24917602-24917685,
24917751-24918251,24918520-24919207
Length = 459
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 CKSIRGTY*-RCWTIWVAGSVCSRSRESVGSRWQDWSSTSIVWRSSIGCRYWSSKR 281
C S RG R W AGS +S S D+S++ ++W + RY+++ R
Sbjct: 300 CSSSRGQLALRKWKAAAAGSALDKSTSS----GVDFSTSVLIWHIATDMRYYTTTR 351
>03_05_0487 +
24838620-24838967,24840526-24840747,24840819-24841109,
24841316-24841513,24841641-24841705,24841788-24841874,
24841988-24842108,24842200-24842244,24842321-24842458,
24842571-24842643,24842723-24842799,24842882-24842989,
24843108-24843224,24843524-24843679,24843780-24843881,
24844036-24844161,24844237-24844314,24844390-24844485,
24844592-24844707,24844781-24844850,24844930-24844983,
24845062-24845205,24845297-24845596,24845780-24846202,
24846316-24846429
Length = 1222
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 80 PCVLFQSIEQTLVQIHTGNVLEVLDHMGSRQ-RMQQEQGECREPLAGLEQHQHSMAKQHR 256
P +L +++ + QI + V+ + ++ R+ + G C PL + ++Q + K+
Sbjct: 617 PDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLF-IVENQRLLIKKRH 675
Query: 257 MPLLEQQEVP 286
+ L+Q+E P
Sbjct: 676 IRALQQRETP 685
>01_05_0583 + 23420160-23420480
Length = 106
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 267 WSSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGR 380
W+ R W +R S CS S WS + G GR
Sbjct: 9 WTRMAGRRRWLKRRRSGACSRASLAWSRSGGCDAQNGR 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,119,163
Number of Sequences: 37544
Number of extensions: 230954
Number of successful extensions: 991
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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