Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    29   0.072
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              28   0.22 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      27   0.29 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   1.2  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    25   1.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   2.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.6  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   4.7  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   4.7  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   4.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 29.5 bits (63), Expect = 0.072
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 140  LEVLDHMGSRQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQ 274
            L+ L H   +Q++QQ+Q + ++     +QHQ    + H  P L Q
Sbjct: 1297 LQTLQHQ-YQQQLQQQQQQQQQQQQQHQQHQQHQLQHHHQPQLSQ 1340


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQEVPH 289
           +Q+ QQ++ + RE     +Q QH   +Q +   ++QQ   H
Sbjct: 247 QQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQH 287


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 390 DSSTGLRSCRSPCCNSICCSYSCTLRCTFCYSNRCGTSC 274
           D +   R  R PCC+++ C       C + +S R   +C
Sbjct: 162 DDARRNRRDRQPCCSTLLCVVVVPFCCRYWHSLRLSYAC 200


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 375 LRSCRSPCCNSICCSYSCTLRCTFCYSNRCGTSCCSSSGI 256
           LRSC    C+S  C+ S  ++C+ C +     +  S +G+
Sbjct: 19  LRSCS---CHSSVCAVSFVMQCSTCNAPTDSANSVSCAGV 55


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 372 EGRCCYQRTQCP 407
           EG+CC +R QCP
Sbjct: 46  EGQCCPKRYQCP 57


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = +3

Query: 180  SRSRESVGSRWQDWSSTSIVWRSSIGCRYWSSKRCRTYWSSKRCSVGCSYRSSKWSCNRG 359
            SRSR   GSR +  S +     S  G R  S  R R+   S+  S   S + S+     G
Sbjct: 1067 SRSRSGSGSRSRSRSGSG----SRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSG 1122

Query: 360  YGRSEGR 380
             G S  R
Sbjct: 1123 SGGSRSR 1129


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 167  RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQEVP 286
            R + QQ+Q + ++     +Q Q    +QH+ P  + Q  P
Sbjct: 1298 RSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRP 1337


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQE 280
           RQ+ QQ+Q + R+     +Q Q     Q +    +QQ+
Sbjct: 336 RQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQ 373



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQ 277
           +Q+ QQ+QGE   P    +Q Q    +Q +    +QQ
Sbjct: 440 QQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQ 476



 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 167 RQRMQQEQGECREP---LAGLEQHQHSMAKQHRMPLLEQQE 280
           +Q+ QQ+QGE   P       +Q QH   +Q +    +QQ+
Sbjct: 286 QQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQ 326



 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQEVPH 289
           +QR QQ++ + ++     +Q Q    +Q +     +Q +PH
Sbjct: 345 QQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPH 385



 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQE 280
           +Q+ QQ+QGE   P    +Q Q     + +    +QQ+
Sbjct: 253 QQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQ 290



 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +2

Query: 167 RQRMQQEQGECREPLAGLEQHQHSMAKQHRMPLLEQQEVP 286
           +Q+ QQ++ + +      +Q QH   +Q      +QQ+ P
Sbjct: 340 QQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQP 379


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 86  VLFQSIEQTLVQIHTGNVLEVLDHMGSRQRM 178
           VL++  E T V IH G ++      GS +RM
Sbjct: 365 VLYRKPELTPVAIHAGRIIARRLFGGSEERM 395


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 86  VLFQSIEQTLVQIHTGNVLEVLDHMGSRQRM 178
           VL++  E T V IH G ++      GS +RM
Sbjct: 341 VLYRKPELTPVAIHAGRIIARRLFGGSEERM 371


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 86  VLFQSIEQTLVQIHTGNVLEVLDHMGSRQRM 178
           VL++  E T V IH G ++      GS +RM
Sbjct: 338 VLYRKPELTPVAIHAGRIIARRLFGGSEERM 368


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 173 RMQQEQGECREPLAGLEQHQHSMAKQHRMP 262
           + QQ+Q + +    G+ QHQ    +Q R P
Sbjct: 285 QQQQQQRQLQRQAVGIAQHQQQ--QQQRQP 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,073
Number of Sequences: 2352
Number of extensions: 8388
Number of successful extensions: 55
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)