Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.7  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   EKIYKFNNACVLITRIACILRF 68
           E++Y + +  +LITRI C+  F
Sbjct: 316 ERLYFYWSFALLITRIVCLCLF 337


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 309 FISYNIFQCKMIFVF 353
           F+SYNI+ C+ +  F
Sbjct: 192 FVSYNIYVCQTVSNF 206


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 309 FISYNIFQCKMIFVF 353
           F+SYNI+ C+ +  F
Sbjct: 118 FVSYNIYVCQTVSNF 132


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 144 PTRLVCFRKSASYQFPIH*NCFDIIFSKNND 236
           P R  C +       PI+ N FD++    ND
Sbjct: 333 PWRSYCIQPPCGQLNPINPNVFDVLKLLYND 363


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 44  AHCMHIAFLL*YVYLIS 94
           + CM++ FLL + YL++
Sbjct: 124 SQCMYMYFLLGFRYLVN 140


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 44  AHCMHIAFLL*YVYLIS 94
           + CM++ FLL + YL++
Sbjct: 438 SQCMYMYFLLGFRYLVN 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,506
Number of Sequences: 336
Number of extensions: 2434
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)