Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307G08f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 25 0.54
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 25 0.54
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.9
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 22 2.9
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 5.0
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 5.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 5.0
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 6.6
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 6.6
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 24.6 bits (51), Expect = 0.54
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 250 SNALPDSDPTPTLSSRYDRTF 188
++A PD +P P L RYD +
Sbjct: 30 TSANPDEEPDPELLDRYDNFY 50
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 24.6 bits (51), Expect = 0.54
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 250 SNALPDSDPTPTLSSRYDRTF 188
++A PD +P P L RYD +
Sbjct: 30 TSANPDEEPDPELLDRYDNFY 50
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.0 bits (47), Expect = 1.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -1
Query: 482 FHLELQE--QQDGKQELLL*EAASFTVLVVLREFNI---ESPVGSVRDLRVLEHKL 330
F L LQ+ D K +LL+ + + + ++N+ ES G V+DLR+ +KL
Sbjct: 33 FGLTLQQIIDVDEKNQLLI---TNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.0 bits (47), Expect = 1.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -1
Query: 482 FHLELQE--QQDGKQELLL*EAASFTVLVVLREFNI---ESPVGSVRDLRVLEHKL 330
F L LQ+ D K +LL+ + + + ++N+ ES G V+DLR+ +KL
Sbjct: 33 FGLTLQQIIDVDEKNQLLI---TNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKL 85
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 380 ESPVGSVRDLRVLEHKL 330
ES G V+DLR+ +KL
Sbjct: 69 ESEYGGVKDLRITPNKL 85
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 380 ESPVGSVRDLRVLEHKL 330
ES G V+DLR+ +KL
Sbjct: 69 ESEYGGVKDLRITPNKL 85
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 380 ESPVGSVRDLRVLEHKL 330
ES G V+DLR+ +KL
Sbjct: 69 ESEYGGVKDLRITPNKL 85
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +3
Query: 36 CILLASVAIATSYSIKDNEIELPRLRTSDDLLDSVISDCFE 158
C+ +A Y+IK + + L + SD L ++ ++ E
Sbjct: 11 CVSVALARPEDQYTIKYDNVNLKEILQSDRLTENYVNCLLE 51
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.4 bits (43), Expect = 5.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 103 RGYGRVMICWIVLSVIVSKPDRPWHASK*KFYHIWTTKS 219
+G+G V I +++V+ +RPW +I T+S
Sbjct: 51 KGFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRS 89
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.4 bits (43), Expect = 5.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 103 RGYGRVMICWIVLSVIVSKPDRPWHASK*KFYHIWTTKS 219
+G+G V I +++V+ +RPW +I T+S
Sbjct: 52 KGFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRS 90
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 5.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 103 RGYGRVMICWIVLSVIVSKPDRPWHASK*KFYHIWTTKS 219
+G+G V I +++V+ +RPW +I T+S
Sbjct: 52 KGFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRS 90
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 420 ELHRSRCSQGIQYRIPCRLC 361
E R +CS G+ Y R+C
Sbjct: 118 EASRYQCSPGLAYDREARVC 137
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 420 ELHRSRCSQGIQYRIPCRLC 361
E R +CS G+ Y R+C
Sbjct: 118 EASRYQCSPGLAYDREARVC 137
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,004
Number of Sequences: 336
Number of extensions: 2177
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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