Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   0.94 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.6  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 243 CTVIDSAQKVLPILKVASPI 302
           C VI+  +KVLP  K   PI
Sbjct: 96  CDVIEKPRKVLPNFKTDEPI 115


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  MCASENFMLGFRLLLYC 73
           MC + N + GF +++ C
Sbjct: 245 MCGAINMLFGFPIIIGC 261


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 521 HYILFAFINI 492
           HY++F F+N+
Sbjct: 95  HYLIFIFVNV 104


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 266 KSFTNTESCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           K  T   +C      DVTF I     +     N++ PC+
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCV 223


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 266 KSFTNTESCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           K  T   +C      DVTF I     +     N++ PC+
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCV 223


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 266 KSFTNTESCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           K  T   +C      DVTF I     +     N++ PC+
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCV 223


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 266 KSFTNTESCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           K  T   +C      DVTF I     +     N++ PC+
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCV 223


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 266 KSFTNTESCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           K  T   +C      DVTF I     +     N++ PC+
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCV 223


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 278  NTESCISHTSADVT 319
            N E C+ HT+A  T
Sbjct: 965  NVEGCMQHTAAPPT 978


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,324
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)