Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    29   0.13 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    26   0.88 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.2  

>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 3   SQMEHYTCAHLRILCSALDCCYTVIEIEQLPVKFVNDALKQLSY 134
           SQ+ H T AHLR LC   D  +     + + +  ++D +  L Y
Sbjct: 14  SQIVHTTSAHLRELCEKRDIFFEPYRCQLVDLDLLDDPVLYLLY 57


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 181 LEQELRLLITFLNPLE*DSCFRASFTNFTGNCSISITV 68
           L Q   ++IT ++PL  D   R++  N TG+ S   T+
Sbjct: 318 LTQMTEVIITNVDPLANDGDIRSAIGNVTGSASSIATI 355


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 287 SCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           +C      D+TF IT   ++     NI+ PC+
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 255


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 287 SCISHTSADVTFQITDNSESKRNL*NILRPCL 382
           +C      D+TF IT   ++     NI+ PC+
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 255


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 69  TVIEIEQLPVKFVNDALKQLSYSKGFKNVI 158
           T  +IEQ   + +ND  + L    G +N+I
Sbjct: 690 TTAQIEQENTQMINDLYRLLKKYTGLRNLI 719


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 69  TVIEIEQLPVKFVNDALKQLSYSKGFKNVI 158
           T  +IEQ   + +ND  + L    G +N+I
Sbjct: 690 TTAQIEQENTQMINDLYRLLKKYTGLRNLI 719


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,344
Number of Sequences: 2352
Number of extensions: 7000
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)