Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 257 MFGCCLFIFSKHVLLKFC 204
           +F C   IF+ H+L   C
Sbjct: 267 LFCCAFIIFTMHLLFLLC 284



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 269 LSLSMFGCCLFIFSKHVLLKFC 204
           L +  F C   IF+ H+L   C
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLC 165


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -2

Query: 292 LCILIDHDLAYQCLDVVFLFFLSMYYSNFVQ*FVDVDLRMENCYIF 155
           LC L+D  L+Y  L      F  + +  F   ++     +E  Y F
Sbjct: 277 LCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYF 322


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 444 IFDNVFGYNFDELTFS*NFSIIIH 373
           +F+++FGY    +TF     +++H
Sbjct: 366 LFNSLFGYQTLLITFHIGSQLVLH 389


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = +1

Query: 247 HPNIDKLSHDQLKYTIQILNKFNITPLEACENAHIFCMN 363
           H  I    HD +K  I +   F   P+ + +     C+N
Sbjct: 4   HALISSDFHDVIKPLINLTKIFGFLPVCSSQKGQKTCLN 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,457
Number of Sequences: 336
Number of extensions: 2694
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)