Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 453 KSVIFDNVFGYNFDELTFS*NFSI 382
           K  + D VFG+  D   ++ NF+I
Sbjct: 642 KMTLDDKVFGFPLDRPMWAWNFTI 665


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 453 KSVIFDNVFGYNFDELTFS*NFSI 382
           K  + D VFG+  D   ++ NF+I
Sbjct: 642 KMTLDDKVFGFPLDRPMWAWNFTI 665


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  IKKICPQQTQAMGIYVRNLL 105
           +KK+CPQ+     + + ++L
Sbjct: 262 LKKLCPQEEACFRLLMNDIL 281


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  IKKICPQQTQAMGIYVRNLL 105
           +KK+CPQ+     + + ++L
Sbjct: 177 LKKLCPQEEACFRLLMNDIL 196


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  IKKICPQQTQAMGIYVRNLL 105
           +KK+CPQ+     + + ++L
Sbjct: 496 LKKLCPQEEACFRLLMNDIL 515


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,094
Number of Sequences: 438
Number of extensions: 2932
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)