Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307G05f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open readi...    29   7.5  
AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein p...    29   7.5  

>AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open reading
           frame 68 protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -1

Query: 326 QGRTPCSTELIQPFS*ALLSQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQF 168
           QG +PC +  +Q  +    SQY +    SAP   +      RTF   SPLR++
Sbjct: 135 QGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 186


>AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein
           protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -1

Query: 326 QGRTPCSTELIQPFS*ALLSQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQF 168
           QG +PC +  +Q  +    SQY +    SAP   +      RTF   SPLR++
Sbjct: 5   QGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,824,260
Number of Sequences: 237096
Number of extensions: 1372686
Number of successful extensions: 3321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3321
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)