Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307G04f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 34 0.082
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 33 0.11
SB_34646| Best HMM Match : DUF1233 (HMM E-Value=3) 33 0.11
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_59156| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 33 0.19
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 33 0.19
SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97) 33 0.19
SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 32 0.25
SB_43160| Best HMM Match : Occludin_ELL (HMM E-Value=8.4) 32 0.25
SB_39078| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_6394| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 32 0.25
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_49157| Best HMM Match : Occludin_ELL (HMM E-Value=8.4) 31 0.58
SB_7945| Best HMM Match : CorC_HlyC (HMM E-Value=1.6) 31 0.58
SB_53847| Best HMM Match : FlaC_arch (HMM E-Value=0.59) 31 0.58
SB_53843| Best HMM Match : FlaC_arch (HMM E-Value=0.59) 31 0.58
SB_16311| Best HMM Match : FlaC_arch (HMM E-Value=0.5) 31 0.58
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 30 1.3
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 30 1.3
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 29 1.8
SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26) 29 1.8
SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72) 29 2.3
SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 29 3.1
SB_50076| Best HMM Match : Filament (HMM E-Value=0.15) 29 3.1
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 3.1
SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 4.1
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 28 4.1
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037) 28 5.4
SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96) 28 5.4
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2) 28 5.4
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_35553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 27 7.1
SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 27 7.1
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 27 7.1
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_6797| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 33.9 bits (74), Expect = 0.082
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Frame = +2
Query: 2 RIRHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL 181
R+ HE ++ + HE++ + + ++ + + R+ I+ N+ Y E ++
Sbjct: 719 RMEHEEQIQALMAQHEDQVKALSQEYEDQIRELREERD-ISEKWSKSNVDAPYSEFENKM 777
Query: 182 KEL---YE---DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISV 322
KE+ YE ++ G EE+ S E E S K ++E KH +EI +
Sbjct: 778 KEIKDHYEREIERLGAENEELRTSSQISEPSERSSAEKHVEEMMEKHASEIEM 830
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 164 EASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 343
+A+ R KEL E + E+ + H +E Y L+Q +E HR NE+ + V +
Sbjct: 417 KANERNKELNESVIQTQSEKDTIKHSLHMMEEQYKGLRQQQEDHRSTVNELETKLEVLSK 476
Query: 344 EL--ANQRENPAEDYTVPVEFTDEEGYGKYLD 433
+L AN+ ++ E + +E KY D
Sbjct: 477 KLLVANEEKSTHEAEIEDIFKAHDELEAKYND 508
>SB_34646| Best HMM Match : DUF1233 (HMM E-Value=3)
Length = 209
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKHFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 47 EERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYED-KDG 208
EE E + E+ H + HR+ + K +++R ++ +R+ +LYE+ +DG
Sbjct: 14 EEEEDDQGQRMVELKHNQPDHRDAVQKKTFTKWVNNRLLKVGVRILDLYEELRDG 68
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/124 (16%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 8 RHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEAS-IRLK 184
R + + Q+R E R + KE+ +T H + ++ + + +EA+ ++
Sbjct: 4304 RRKKLEAQKRKQEREMTREVMEQKKELQDIRTEHVKEAEKQAMIEGIRENGVEAAEFVIR 4363
Query: 185 ELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRE 364
++ + + G +++ + L ++++ H + E+ + E E L ++R
Sbjct: 4364 KVLDKRQGQELKDLERMYMEERRVAVDEALAKMEDRHAQQQEELRLQDKQELEALGSERL 4423
Query: 365 NPAE 376
+P E
Sbjct: 4424 SPEE 4427
>SB_59156| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 339
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +2
Query: 119 INADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHR 298
I D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+
Sbjct: 37 IPRDSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHK 96
Query: 299 KHPNEISVPMSVEFEEL 349
K +EI + +FE+L
Sbjct: 97 K--SEIKKWLEKQFEKL 111
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 32.7 bits (71), Expect = 0.19
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +2
Query: 95 KKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRL 274
KKT + NA+ L+ D + + + L + + KE+ S S E QE L
Sbjct: 4296 KKTLQKSEANAEEALQRRTDELEKLQSQTRSLQSQLELIEKEKESWESRESELQEELQHL 4355
Query: 275 KQ----IKEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDE--EGYGKYLDL 436
++ +++ H E + ++E E+L +++ AE D+ G+Y L
Sbjct: 4356 QKNLVDLEDEEVSHHVEATQQAAIEIEKLCEEKQKLAEHLQNQARENDKLVREEGQY--L 4413
Query: 437 HSCYEKYINLKGIEK 481
H +E I + +E+
Sbjct: 4414 HRIHELEITVNRLEE 4428
>SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97)
Length = 273
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 15 DSRIEGLENQLSELKHRLSDVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 72
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 73 SEIKKWLEKQFEKL 86
>SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 272
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_43160| Best HMM Match : Occludin_ELL (HMM E-Value=8.4)
Length = 116
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_39078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 15 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 72
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 73 SEIKKWLEKQFEKL 86
>SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_6394| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 149
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R++ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 31.9 bits (69), Expect = 0.33
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHR-LKNLHDRYIEASIRLKEL 190
E I+ + R E + +D + EI K+ +E H L++L D + ++++++
Sbjct: 982 EKIIIESREKEEALVQDLDNLRNEIKQKEKQSKEKDEDLHNNLRDLSDERQTSELKVRDI 1041
Query: 191 YEDKDGLRKEEISALS---------GPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 343
+ + L+KE S +E R+ ++ E HR +++ E
Sbjct: 1042 LNENNQLKKELTSVKKELDCRILXXXXSVKKELDCRIMEMVENHRHELDDLRTQAEKRLE 1101
Query: 344 ELANQRENPAEDYTVPVE---FTDEEGYGKYLDLH 439
EL Q E+ E ++ E + + L+ H
Sbjct: 1102 ELIQQHESEMEGVDSRIQQARLESENNFKEILETH 1136
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEILHKKTGHRET-INADHRLKNLHDRYIEASIRLKEL 190
E + +Q RS E ++ +A + + ++ T E+ +N RLK L E+
Sbjct: 1767 EDMQKQSRSRVAEMKKKAEAKISSVKNQLTTQLESKVNEITRLK----------ANLGEV 1816
Query: 191 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQ 358
++ + L+ E L+ EF +LK KE H K E + + EEL+ Q
Sbjct: 1817 EKNMEELKSEHSKELA--RAAAEFNEKLKDQKESHEKGAGEREKELLQQVEELSTQ 1870
>SB_49157| Best HMM Match : Occludin_ELL (HMM E-Value=8.4)
Length = 116
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R+ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIGELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_7945| Best HMM Match : CorC_HlyC (HMM E-Value=1.6)
Length = 516
Score = 31.1 bits (67), Expect = 0.58
Identities = 31/161 (19%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Frame = +2
Query: 23 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 202
+ ++ S ++ ++ + + E +H++ + + R+++L + Y+ R +Y+ +
Sbjct: 168 VHREGSVYQVPDKVREEDLAEYVHREESVYQ-VRVTVRVEDLAE-YVH---REGSVYQVR 222
Query: 203 DGLRKEEISAL---SGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPA 373
+RKE+++ GP R + + E+ + + VP+ V E+LA
Sbjct: 223 VTVRKEDLAEYVHREGPVYQVRITVRKEDLAEYVHREGSVYQVPVKVRKEDLAEYVHREG 282
Query: 374 EDYTVPVEFTDEEGYGKYLDLH-SCYEKYINLKGIEKVDYI 493
Y VPV+ EE +Y+ S Y+ + ++ + Y+
Sbjct: 283 SVYQVPVK-VREEDLAEYVHREGSVYQVRVKVRKEDLAKYV 322
>SB_53847| Best HMM Match : FlaC_arch (HMM E-Value=0.59)
Length = 259
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R+ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIGELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_53843| Best HMM Match : FlaC_arch (HMM E-Value=0.59)
Length = 149
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R+ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIGELENQLSELKHRLADVVKERDGMRKELGKEKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_16311| Best HMM Match : FlaC_arch (HMM E-Value=0.5)
Length = 240
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHP 307
D R+ L ++ E RL ++ +++DG+RKE + ++ + L+ +FH+K
Sbjct: 37 DSRIGELENQLSELKHRLADVVKERDGMRKELGKQKKPFLQPRKPFCDLEPKAQFHKK-- 94
Query: 308 NEISVPMSVEFEEL 349
+EI + +FE+L
Sbjct: 95 SEIKKWLEKQFEKL 108
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 14 EAILEQQRSYHEERERT-MDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIR---- 178
+AILE + E+R R ++ + +E+ + +E A+ + L ++ +E +
Sbjct: 227 QAILEAENLQEEKRRREELERLHQELQNILLAEKEAREAETNARALQEKLLEEEKKRLEE 286
Query: 179 LKELYEDKDGLRKEEISALSGPHEFQEFYSRL 274
L+ L E+KD + +EE+ E Q+ ++
Sbjct: 287 LERLKEEKDKMLEEELKKRETLEEKQKLQDKI 318
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMD---AMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 184
E L+ Q + H ++ T++ A +KE++ +K G+ +NA R+ L E + +
Sbjct: 66 EKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGNANKVNA--RVAELEKELKEKTKSAE 123
Query: 185 ELYEDKDGLRKEEISAL 235
+L + + R++EI AL
Sbjct: 124 KLVKASE-KREKEIDAL 139
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEI-LHKKTGHRETINADHRLKNLHDRYIE-ASIRLKE 187
EA++EQ R+ E T+ + KEI + + G ++ + + R ++ +++
Sbjct: 822 EAMIEQSRAERTRYEETISGLRKEIVVVRDEGQKKVYQQLESYSDGYRRELQRKEAMIQQ 881
Query: 188 LYEDKDGL------RKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 349
LY +K L +K+E+ L + Q KQ + + R+ P+ + + + +
Sbjct: 882 LYAEKSKLQSEFERQKQEVYVLQHDFQKQVAIEVAKQAESYQRQIPSLRAEVLQYQTQAE 941
Query: 350 ANQRENPA----EDYTVPVE 397
+ +RE A DY V ++
Sbjct: 942 SVKREMTAIQSKSDYEVSIQ 961
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 29.5 bits (63), Expect = 1.8
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 3/152 (1%)
Frame = +2
Query: 23 LEQQRSYHEERERTMDAMVKEILHK-KTGHRETINADHRLKNLHDRYIEASIRLKELYED 199
LE+Q EE E + A + E K + +E H ++ D E K++ +
Sbjct: 25 LEKQLKQAEESECALLAELGESKSKLRRAEKELNTLQHNVQIAEDACKEKEKAKKQMEQ- 83
Query: 200 KDGLRKEEISALSGPHE--FQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPA 373
R EI G E +E S+ K + + + E++ +S ++EEL ++++
Sbjct: 84 ----RMAEIGVEKGNVERSLEEVQSQNKDLMQQAERAKAELA-KLSAKYEELEDEKDEMQ 138
Query: 374 EDYTVPVEFTDEEGYGKYLDLHSCYEKYINLK 469
E + + E DL +KY +LK
Sbjct: 139 ESLSDTIREKSREIRDLEADLEMSEQKYEDLK 170
>SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26)
Length = 363
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +2
Query: 23 LEQQRSYHEERERT---MDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELY 193
LEQQRS ++E+ER + + +K + K ++E N+ + N + + S+R + Y
Sbjct: 44 LEQQRSMNKEKERQKEYLSSEIKRLEEKMEDYKEKCNSSEKKLN-NALAVSTSLRKQMAY 102
Query: 194 -EDKDG----LRKEEISALSGPHEFQEFYSRL 274
+ ++G ++E I+ ++F+ Y L
Sbjct: 103 LKQQEGECAQAKQEAITCRQELNKFKRLYFNL 134
>SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72)
Length = 1041
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 254 QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLD 433
+EF KQ+ E K + V ++ L + + YT P + D EG G+ L
Sbjct: 552 REFLFVFKQLMETRDKDKAKEDVLPNLPLPMLDSNATSTIRSYTSPSDGKDTEGRGEVLG 611
Query: 434 LHSCYEKY 457
L S E++
Sbjct: 612 LTSFEERF 619
>SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKE 220
D R++ L ++ E RL ++ +++DG+RKE
Sbjct: 37 DSRIEELENQLSELKHRLADVVKERDGMRKE 67
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 8 RHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETI 121
RH + L Q YH R R +D +E+ K+ +E +
Sbjct: 710 RHTSDLLSQAQYHVSRARKLDEQEQELRRKQEAEKEAL 747
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 149 HDRYIEASIRLKELYEDKDGL--RKEEISALSGPHEFQEFYSRLKQIKE 289
H++ +E S RL+ + DKD E +FQ F ++L+Q+++
Sbjct: 687 HEKLVETSARLQRMIPDKDAFINTLRESRTEEYQAKFQAFQAKLEQVRK 735
>SB_50076| Best HMM Match : Filament (HMM E-Value=0.15)
Length = 380
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 140 KNLHDRYIEASIRLKELYEDKDGLRKE 220
+ LH+ YIE +L+EL++D + +KE
Sbjct: 133 EELHNDYIEMQRKLEELWQDNEKYKKE 159
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +2
Query: 95 KKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRL 274
K G+ TI +H+L+ + + A LK + + LRK+ + E + + S +
Sbjct: 235 KSDGYSTTIPVEHKLRYIWRQLTRAESSLKSSLDSVEQLRKQHAEEMI---EVENYVSHI 291
Query: 275 KQIKE 289
+Q+ +
Sbjct: 292 RQLSD 296
>SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 929
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 412 FFISELDRNCVILSRIFPLI-CQLFKFYRHGYR 317
+F D+N V++ R+FP I C++ + Y + +R
Sbjct: 882 YFKGNRDQNSVVMHRLFPRIRCRVIRLYPYTWR 914
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 140 KNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEIS 319
KNL + AS++LK+ + +++E + + G EFQ+ ++ KQ+ E E+
Sbjct: 177 KNLENEV--ASLKLKQ-----ETIKEEVVEEIEGDEEFQKLQNKYKQVVEEKNTLQGELD 229
Query: 320 VPMSVEFEEL 349
+ + EEL
Sbjct: 230 -GLQTQLEEL 238
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 266 SRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPA 373
S+L+ IKEF H ++ ++ E ++ANQ + A
Sbjct: 3 SQLRHIKEFRASHRANETISLTSETNDIANQNTDTA 38
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 179 LKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEF 340
L+ D++ L E +SAL QEF ++ IKE + + I+V ++ EF
Sbjct: 267 LERFRTDREKLDPEMLSALQNWFSSQEFLKQIDTIKEQAKTQKSGINVFITDEF 320
>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
Length = 396
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/77 (22%), Positives = 39/77 (50%)
Frame = +2
Query: 182 KELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQR 361
KEL +D + +++ +S ++QE ++ ++++E + + E+ EEL
Sbjct: 6 KEL-QDLESANNQKL--MSEYEKYQELQAKSQKMQEDYERQLTEMEEAREQVLEELTEYY 62
Query: 362 ENPAEDYTVPVEFTDEE 412
EN ++ T ++ + EE
Sbjct: 63 ENKLQEKTAQLDQSQEE 79
>SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96)
Length = 772
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 195 KIKMDYEKKKYQHCQDHMSSRSSIRDLSKLK 287
K+K DY+ + Y+ Q +S +S ++ L+ LK
Sbjct: 657 KLKDDYDSEDYEDQQSDLSEKSEMQTLNDLK 687
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +2
Query: 290 FHRKHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLK 469
+HR+ I + +++ L++ + + Y++PV T+++ G D +Y+N
Sbjct: 259 YHRRRNIIIIIVVAISLSSLSSSSSSSSSSYSIPVRVTNKKD-GTVKDSPFAIYQYLNTI 317
Query: 470 GIE 478
G E
Sbjct: 318 GGE 320
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 110 RETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALS 238
RET+ + +L DRY E + +KE+ E L KEE + LS
Sbjct: 84 RETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLS 126
>SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2)
Length = 1094
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Frame = -2
Query: 511 KYAQVCNIIYFLNTFQ----------VNVLFITRM*VQILSIAFFISELDRNCVILSRIF 362
K ++CN++ FQ V V+ I +Q S FF+ ++ NC +S+I
Sbjct: 43 KKNKICNLVLTRKAFQCRRFDEVRCFVRVIGIQYSKMQEQSTFFFLIKVTHNCSQISKIS 102
Query: 361 PLICQLFKFYRHGYRYF 311
++ +F + RYF
Sbjct: 103 FIVFTIFTIFSAVLRYF 119
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 137 LKNLHDRYIEASIRLKELYEDKDGLRKE-EISALSGPHEFQEFYSRLKQIKEFHRKHPNE 313
++ + D + + + + EL ++ L+K E Q+F + K++KE KH E
Sbjct: 780 VQRIEDVFRDLTAKYTELETQRELLKKSVETFEEEKNINIQKFEQQQKELKELLEKHKTE 839
Query: 314 ISVPMSVEFEELANQRENPAEDYT 385
+ + EEL +R D T
Sbjct: 840 NEDWIQTKKEELEEERAALQRDRT 863
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 RIRHEAILEQQRSYHEERERTMDAMVKEILHKKT----GHRETINADHRLKNLHDRYIEA 169
+I E + Q++ E E+ +A+ KE+ ++ E RLK + + I
Sbjct: 336 KIEAEKLQLQEKKDMAEEEK--NAVAKELEKREKDLMEAEEEQNKLQERLKAVESKIIVG 393
Query: 170 SIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHR 298
+ L E ++++ L +E L+ E QE +L + KE R
Sbjct: 394 GVNLLEKAKEQELLLEESAKELAERRERQENLQKLIKEKEQER 436
>SB_35553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +2
Query: 215 KEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPV 394
++E+ G H F + ++ KQ+K+ ++ N + + ++ N + ++ PV
Sbjct: 196 RQELGGEGGEHTFVDGFNIAKQLKKEDPENFNRLCTARILYQRKVTNHDADLKMSFSHPV 255
Query: 395 EFTDEEGYGKYLDLHSCYEKY 457
D++G K + C EKY
Sbjct: 256 IRLDDKGRLKRI---ICSEKY 273
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADH 133
EA+ EQ R E E A V+EIL + ETI AD+
Sbjct: 254 EAVHEQYRDEIVELESKHSAHVEEILEEHQLEIETIKADY 293
>SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 269
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/60 (21%), Positives = 25/60 (41%)
Frame = +2
Query: 2 RIRHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL 181
R +H + R+ H E R+M K + + + N H+ + LH + + R+
Sbjct: 179 RTKHAGYTQTMRTKHAEYTRSMRTYTKHAEYTQIMSTKHANHAHKTRRLHSNHAHKTRRI 238
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 324 GTDISFGCFL*NSLICLSLE*NSWNSCGPDNADISSFRNP 205
G I+ GC SL+ L L+ N+ D DI+S+ NP
Sbjct: 1694 GDLIALGCEQPLSLVALRLQARHMNAVMSDTGDITSWGNP 1733
>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = +2
Query: 8 RHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 187
+ EAIL +S EE + IL + H+E ++ +L+N + E R K+
Sbjct: 485 KREAILRDLKSQKEESDMLERTKRDIILDRTLRHQEMLDTRRKLEN---SWAEHVTRKKD 541
Query: 188 LYEDKDGLRKEEISALSGPHEFQEFYSRLKQIK 286
E+++ +R + L HE E Y R Q +
Sbjct: 542 -REEEERMRAQSPGMLI--HEQCEKYRRCNQCR 571
>SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 119 INADHRLKNLHDRYIEASIRLKELYEDKDGLRKE 220
++ ++ L ++ E + RL E+ +++DGLRKE
Sbjct: 58 VDVSAKIGELENQLSELTHRLAEVVKERDGLRKE 91
>SB_6797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 128 DHRLKNLHDRYIEASIRLKELYEDKDGLRKE 220
D R+ L ++ E RL ++ +++DG+RKE
Sbjct: 37 DSRIGELENQLSELKHRLADVVKERDGMRKE 67
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 27.1 bits (57), Expect = 9.4
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEILHKKTGHRET-----INADHRLKNLHDRYIEASIR 178
EA EQ+R+ ++E + A + E H GH+E I D L + DRY A
Sbjct: 1114 EASEEQRRASNQELMQVR-ARLSESEHALHGHKEVLTQELIGKDSELDVIKDRYNAA--- 1169
Query: 179 LKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEIS 319
L E++E +R+ + + +E ++ +Q++ +K +I+
Sbjct: 1170 LSEIHEYDKQVRQLKADRSNSQYEMEKSRFYTEQLEADLKKCREQIA 1216
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 8 RHEAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINA 127
RHEAIL ++R + E++ER +IL ++ + A
Sbjct: 219 RHEAILRKKRMFLEQQERKKQEREDKILAQQIAFEDAKKA 258
>SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 27.1 bits (57), Expect = 9.4
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 1/162 (0%)
Frame = +2
Query: 14 EAILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELY 193
E + + Y +R +K L+K T + ++L DR + + +
Sbjct: 246 ERVSRSELEYRAQRLNLQIDDLKSRLNKDTYQTSNFDNIRGERDLLDREVMDLKKTNTVL 305
Query: 194 EDKDGLRKEEISALSGPHEF-QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 370
E + +E+ + ++ + LKQ KE+ K E+S S+ E+L Q
Sbjct: 306 EANLKSKIDELGEYQKEMQATKQSLALLKQDKEYLNKQVQELSTRSSLAEEQL-GQVTKQ 364
Query: 371 AEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYIT 496
D V+ EE Y KY+ Y+ +K ++D I+
Sbjct: 365 LND----VKQAREELYEKYISTREQYKSEYEVKLKGELDQIS 402
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 23 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 202
+E Y R T++ V +LH+ + E N R K+ + +A RLKE +
Sbjct: 279 VESDLKYKTARISTLEKEVA-VLHQ--ANAELKNKADRFKHTEEEKNKAIERLKEATISE 335
Query: 203 DGLRKEEISALSGPHEFQEFYSRLKQIKE 289
G R EI+ L+ + ++ K+++E
Sbjct: 336 KGKRNNEITELN--IKLEKLEKEFKELQE 362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,200
Number of Sequences: 59808
Number of extensions: 296036
Number of successful extensions: 1068
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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