Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307G03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44) 49 3e-06
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 41 7e-04
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) 34 0.062
SB_9641| Best HMM Match : MAT1 (HMM E-Value=0.47) 31 0.58
SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16) 28 4.1
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 28 4.1
SB_37508| Best HMM Match : S-antigen (HMM E-Value=4.3) 28 4.1
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 27 7.1
SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64) 27 7.1
SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_55456| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.4
>SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)
Length = 405
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 121 MAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFL 291
MA+SD D+SLYPIAVLIDEL+NEDVQ +++ L I+ L + ++ +P L
Sbjct: 1 MASSDG--DDSLYPIAVLIDELRNEDVQ----AVESLRLISADLSTQDLENHFVPLL 51
Score = 36.3 bits (80), Expect = 0.015
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 142 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-E 318
T E L P+ + + LK+E ++RLN I L + +GV + L+P + E D
Sbjct: 270 TIEHLLPLFLTM--LKDEFPEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWR 327
Query: 319 VLLALAEQLGNFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQ 492
V LA+ E + +G F L + +R+ A +L+ + E P+
Sbjct: 328 VRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAAINLKKLVEKFGPE 385
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 445 KAVASLRAVAEHHSPQALEEHFVPL 519
+AV SLR ++ S Q LE HFVPL
Sbjct: 26 QAVESLRLISADLSTQDLENHFVPL 50
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +1
Query: 241 ALALGVERTKSELIPFLTETIYDE-DEVLLALAEQLGNFINLVGGGEFAHCLLPPLETLA 417
A + +E KSEL+P T DE D V L E ++ + L+P +++ A
Sbjct: 102 AKVMELEFVKSELVPLFTNLSSDEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAA 161
Query: 418 AVEETVVRDKAVASLRAVAEHHSPQALEEHFVP 516
+ VR + + + P+ + VP
Sbjct: 162 YDKSWRVRYMVADKITELQKAVGPEITKTELVP 194
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +1
Query: 190 NEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQLGNFINLV 366
+E +RL +++ IA L E S L+P + YD+ V +A+++ V
Sbjct: 124 DEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAAYDKSWRVRYMVADKITELQKAV 183
Query: 367 GGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALE 501
G L+P + L E VR A ++ +E S E
Sbjct: 184 GPEITKTELVPAFQVLLKDCEAEVRAAAAGKVKEFSESLSSDIRE 228
>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
Length = 722
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 DVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQLGNFINLVGG 372
D ++R ++L +IA ALG E TK+ +IP L E DE+ V L+ E + N +NL+
Sbjct: 12 DYEVRACMCQELESIARALGTETTKTSVIPELVELTNDEETSVRLSGMETITNLLNLLDD 71
Query: 373 GEF 381
F
Sbjct: 72 VNF 74
>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
Length = 426
Score = 34.3 bits (75), Expect = 0.062
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 QLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQLGNFINLVGGGE 378
++RLN I L + +GV + L+P + E D V LA+ E + +G
Sbjct: 3 EVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDF 62
Query: 379 FAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVP 516
F L + +R+ A +L+ + E P+ ++ +P
Sbjct: 63 FDEKLNTLCMSWLVDHVCSIREAAAINLKKLVEKFGPEWAQQQVIP 108
>SB_9641| Best HMM Match : MAT1 (HMM E-Value=0.47)
Length = 642
Score = 31.1 bits (67), Expect = 0.58
Identities = 27/95 (28%), Positives = 40/95 (42%)
Frame = +1
Query: 223 KKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGNFINLVGGGEFAHCLLPP 402
K+ ST+ ++R K L TET+ D + LL AE GN +L F
Sbjct: 404 KRKSTLEEIEEIKRKKRRLDSD-TETLNDTADQLLQKAEDEGNLRHLTQANSFRRTAKDK 462
Query: 403 LETLAAVEETVVRDKAVASLRAVAEHHSPQALEEH 507
++ L VE T R + +A+ Q +EH
Sbjct: 463 MDELVQVENTHQRQDGM-----IADFCDGQVFKEH 492
>SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1528
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 196 DVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYD 309
DV L L+++KK++ I + VE K + P ++ +YD
Sbjct: 716 DVTLSLDNLKKMALIIASRAVEEFKKIVSPRFSKPLYD 753
>SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16)
Length = 425
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 181 ELKNEDVQLRLNSIKKLSTIALA--LGVERTKSELIPFLTETIYDEDEVL 324
EL D+Q ++ S LA LG + TK+EL+P + D DE+L
Sbjct: 55 ELLASDMQWKVRRTLAFSIHELAQVLGEDLTKTELVPTFNSFLKDLDELL 104
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 94 KLKRVKYVRMAA---SDSGTDE-SLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVE 261
K KR KYVR +A SDS DE S P+AVL E+K ++ I+ + + L G
Sbjct: 581 KPKR-KYVRKSAPVESDSSDDEDSNKPLAVLQQEIKESPEKVVTKVIRVMRKVKLKNGEI 639
Query: 262 RTKSELIPFLTETIYDEDEVL 324
+ K + TI E ++
Sbjct: 640 KKKLVKVIRKVRTIKTEAAIV 660
>SB_37508| Best HMM Match : S-antigen (HMM E-Value=4.3)
Length = 1347
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 286 FLTETIYDEDEVLLALAEQLGNFINLVGGGEFAHCLLPPLETLAAVEETVVRDKA 450
FL I DE+ V L E + N ++ +G HCL+P + + E ++ ++
Sbjct: 502 FLMTGISDENGVTLPAYELVTNRVSELGDNVTDHCLMPRVSQVEHAENCLMTGRS 556
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 384 CKFSPSNQVYEVTKLFSEC*ENLVFIIDCLSE 289
C+ SP+ + E++KLF+ C + L+ ID L +
Sbjct: 1024 CEGSPAKKSKEISKLFNMCMKVLIENIDALHD 1055
>SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64)
Length = 499
Score = 27.5 bits (58), Expect = 7.1
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Frame = +1
Query: 85 FELKLKRVKYVRMAASDSGTDESLYPIAVLIDELKNED---VQLRLNSIKKLSTIALALG 255
F +K YV+ S + YP V + +++ D + S + T+ + L
Sbjct: 313 FLVKTSLWSYVQQLLSYVTGKKGYYPYDVSCNAIRSFDHTTIHTDCGSHENDFTVLIYLN 372
Query: 256 ---VERTKSELIPFLTETIYDEDEVLLALAEQLGNFINLVGGGEFAHCLLPPLETLAAVE 426
E + E + F T E++ A+ +LG + G HC PP+ T V
Sbjct: 373 RNWAENSHGETVFFADNT---SSEIVCAVRPKLGRVA--IFHGHIPHCARPPVSTFFGVR 427
Query: 427 ETVVRDKAVASLRAVAE 477
T+ A + +A+AE
Sbjct: 428 YTLAIKTAPS--KAIAE 442
>SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 166 AVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQ 342
A ++++L+ D+++ L ++K A+G E K +LI F+T+ E L LA Q
Sbjct: 141 ATILNQLEQIDLKVELEKLQK----GQAIGDEHHKRQLIDFITDQRQLLAECLYGLACQ 195
>SB_55456| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 736
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 190 NEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIY 306
NE+ + + I+ ST+ L LG+E ++ P TE Y
Sbjct: 40 NENATIGIQGIRNDSTLFLFLGIEDDYNDNAPVFTEQPY 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,309
Number of Sequences: 59808
Number of extensions: 222275
Number of successful extensions: 513
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -