Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 437 IIFNYFIRILFYYFTS 484
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 437 IIFNYFIRILFYYFTS 484
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 144 GTYQGKHTILVNKGLR 191
           G + G+ T+L + GLR
Sbjct: 109 GCFSGESTVLTSTGLR 124


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 447 TILLGFYFTILQAYEYIE 500
           T+LLG  F    A+EYI+
Sbjct: 122 TLLLGVDFVKEYAFEYIQ 139


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 447 TILLGFYFTILQAYEYIE 500
           T+LLG  F    A+EYI+
Sbjct: 122 TLLLGVDFVKEYAFEYIQ 139


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 447 TILLGFYFTILQAYEYIE 500
           T+LLG  F    A+EYI+
Sbjct: 442 TLLLGVDFVKEYAFEYIQ 459


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,011
Number of Sequences: 336
Number of extensions: 1435
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)