Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F11f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1FWD1 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_Q7Z4P9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q9VT17 Cluster: CG3280-PA; n=1; Drosophila melanogaster...    32   9.2  

>UniRef50_A1FWD1 Cluster: Putative uncharacterized protein; n=1;
           Stenotrophomonas maltophilia R551-3|Rep: Putative
           uncharacterized protein - Stenotrophomonas maltophilia
           R551-3
          Length = 396

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -1

Query: 467 QGGIGMLRLEAHIVGKHWKVHHPKPIL--LDQDLNQMG 360
           +G + +   EA  + + WKVHHP+ +L  L QD  ++G
Sbjct: 184 EGSLSLTADEAEFIREQWKVHHPQTLLVWLAQDKGRLG 221


>UniRef50_Q7Z4P9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 182

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -1

Query: 506 MKHPDWHIQMIVVQGGIGMLRLEAHIVGKH---WKVHHP 399
           M HP  H Q+  V G +G   LEA  +G H   W  HHP
Sbjct: 140 MTHPVHHQQLACVSGWLGTSLLEATCLGPHGGSWWGHHP 178


>UniRef50_Q9VT17 Cluster: CG3280-PA; n=1; Drosophila
           melanogaster|Rep: CG3280-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 1937

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 268 STAKTFTQSPSSLAVWPQH*LPLASCTCSSTKVGTEIQHILSYNNCVKIIALRANI 101
           ST+       +S A W +    L S T ++  + T +Q +  YN  VK   LR NI
Sbjct: 567 STSDGLFDDSTSTATWGEDGGGLFSTTAAAALISTTVQRLKCYNMTVKCSKLRRNI 622


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,094,107
Number of Sequences: 1657284
Number of extensions: 10518494
Number of successful extensions: 26099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26089
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)