Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F10f
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    25   0.28 
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    25   0.28 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.85 

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 185 LKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSKILQA-EQAASLRSRIVLPLQ 361
           + TA+ A  +   T+Y+ ++    L N  +   +L  L K  +  E+AA LR  I   L 
Sbjct: 10  IATAVAATYDVYPTKYDNVDIDAILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALI 69

Query: 362 LSCER 376
             C +
Sbjct: 70  TGCRK 74


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 185 LKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSKILQA-EQAASLRSRIVLPLQ 361
           + TA+ A  +   T+Y+ ++    L N  +   +L  L K  +  E+AA LR  I   L 
Sbjct: 10  IATAVAATYDVYPTKYDNVDIDAILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALI 69

Query: 362 LSCER 376
             C +
Sbjct: 70  TGCRK 74


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 461 QVWYEVNLELNHECKLELCLL 399
           + W ++ LE+NH+    +CL+
Sbjct: 402 ETWAKLGLEINHKEDFRVCLV 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,420
Number of Sequences: 336
Number of extensions: 1915
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)