Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F10f
         (489 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g58210.1 68414.m06610 kinase interacting family protein simil...    30   0.96 
At2g10285.1 68415.m01080 expressed protein                             28   3.9  

>At1g58210.1 68414.m06610 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) {Petunia
            integrifolia}
          Length = 1246

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 14/39 (35%), Positives = 27/39 (69%)
 Frame = +2

Query: 113  MNMQQREEKQLEATIVAILNRVNDLKTAIQALINKLETE 229
            +NM+Q E K++   + + L+RV  LKT ++ +++KLE +
Sbjct: 1136 LNMKQ-ENKRVSTELHSGLDRVRALKTEVERILSKLEED 1173


>At2g10285.1 68415.m01080 expressed protein
          Length = 116

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 380 ETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQ 478
           E L H +  R P C+    PD LRTK   +AE+
Sbjct: 47  EPLDHHSITRKPICSFCTQPDKLRTKKRREAEE 79


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,926,273
Number of Sequences: 28952
Number of extensions: 150767
Number of successful extensions: 330
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)