Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   2.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.2  

>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 121 FWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNN 231
           F+ S    + F R+  NF+Y++T+    ++ ++F N+
Sbjct: 649 FYDSLPFGYPFDRV-INFNYFYTKNMYFKDVFIFHND 684


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 326  TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLXGEF 481
            TS+ I++   + I  F  + ++    + +   +   LGF +LF   G  GEF
Sbjct: 2853 TSSWILMNPSSLISSFVSITSVAAKALFFVAKLTMSLGFTYLFAALGQGGEF 2904


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 170  LYQILVKLKYKLQDVQKIKINVD 102
            L +IL +L+ +LQ+VQK+  N D
Sbjct: 1102 LNEILRELEARLQEVQKLLDNAD 1124


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 326  TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLXGEF 481
            TSA I+      I  FR + T  G  +     +   + F +LF    + GEF
Sbjct: 2843 TSAFIVTNPNQLINTFRSITTTLGRALFVTATVAITITFAYLFGALKMGGEF 2894


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,587
Number of Sequences: 2352
Number of extensions: 6342
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)