Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F07f
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   4.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 28  SARRSLTAPNCQCTCPPAKWI 90
           S  R L  P C+  CP  K++
Sbjct: 305 SEARELQLPGCEVLCPLYKYL 325


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 28  SARRSLTAPNCQCTCPPAKWI 90
           S  R L  P C+  CP  K++
Sbjct: 320 SEARELQLPGCEVLCPLYKYL 340


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 49  APNCQCTCPPAKWIDSEGTPSVSKLCT 129
           +P   C CP    + S+G   V K+ T
Sbjct: 57  SPLLSCACPDGLKLLSDGLMCVEKVST 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,393
Number of Sequences: 438
Number of extensions: 2384
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)