Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307F06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   0.71 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   0.71 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.94 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.2  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   8.7  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   8.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/77 (19%), Positives = 31/77 (40%)
 Frame = +1

Query: 262 NNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYT 441
           +N     G++     +++   + N D  LHP P   ++   +   ++     P       
Sbjct: 145 SNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSCEKKI 204

Query: 442 PARKISPIQNLNKSPVK 492
              KISP ++ + + VK
Sbjct: 205 GLSKISPKESQDAANVK 221


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/77 (19%), Positives = 31/77 (40%)
 Frame = +1

Query: 262 NNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYT 441
           +N     G++     +++   + N D  LHP P   ++   +   ++     P       
Sbjct: 93  SNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSCEKKI 152

Query: 442 PARKISPIQNLNKSPVK 492
              KISP ++ + + VK
Sbjct: 153 GLSKISPKESQDAANVK 169


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/77 (19%), Positives = 31/77 (40%)
 Frame = +1

Query: 262 NNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYT 441
           +N     G++     +++   + N D  LHP P   ++   +   ++     P       
Sbjct: 276 SNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSCEKKI 335

Query: 442 PARKISPIQNLNKSPVK 492
              KISP ++ + + VK
Sbjct: 336 GLSKISPKESQDAANVK 352


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 15  FLIKFNFNTAYLNSIMDFINNTKFTY 92
           F ++  FN   L S++DFIN   F +
Sbjct: 342 FRVEDGFNPQRLGSLVDFINLQAFDF 367


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 184 KNFQAFKK*IKMAWFADLAGKAETLLNNLDEQTGAALRNHNVV 312
           +N +   +  K  W++ L  KA++      E     L NH VV
Sbjct: 292 QNTRVASEDFKAIWYSILIKKADSFCKKKLENYSLQLINHRVV 334


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 346 LHPDPSWNQRKRPIPRNLKKISP 414
           ++PDP      R +P N++K  P
Sbjct: 100 IYPDPEKFDPDRFLPENVQKRHP 122


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 346 LHPDPSWNQRKRPIPRNLKKISP 414
           ++PDP      R +P N++K  P
Sbjct: 100 IYPDPEKLDPDRFLPENVQKRHP 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,513
Number of Sequences: 336
Number of extensions: 2826
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)