Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307F06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0039 - 7621613-7622695 34 0.060
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 32 0.32
07_03_0091 + 13312904-13313647 30 1.3
05_03_0040 - 7646525-7647775 30 1.3
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 29 3.0
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 29 3.0
07_03_0089 - 13300902-13301645 29 3.0
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956... 29 3.0
08_02_0079 + 12005624-12005921,12006144-12006550,12007250-12007840 28 4.0
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 28 4.0
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 6.9
09_06_0177 + 21365314-21366100,21367451-21367578,21367715-213678... 27 9.1
07_03_1102 - 23981362-23982219 27 9.1
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 27 9.1
>05_03_0039 - 7621613-7622695
Length = 360
Score = 34.3 bits (75), Expect = 0.060
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP-VKGNQEP 507
HP+P + +P+P K P PEP+ + P + P L+ P K + EP
Sbjct: 177 HPEPKPEPKPKPVPHPEPKPEPKPEPKPHPEPKPEPKPEPKLHPKPEPKPHPEP 230
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+P + +P P+ K+ P PEP+ + P K+ P
Sbjct: 200 PEPKPHPEPKPEPKPEPKLHPKPEPKPHPEPEPKLKP 236
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+P + P P+ K P PEP+ + P K P
Sbjct: 114 PEPKPEPKPYPEPKPKPKPEPKPEPKPEHKPEPKPEP 150
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 489
HP+P + P P + P PEP+ P K P PV
Sbjct: 227 HPEPEPKLKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPKPKPEPKPV 273
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 489
HP+P + P P+ K P PEP+ P K+ P P+
Sbjct: 299 HPEPKPHPMPEPEPK--PKPEPKPEPKPYPEPKPKLKPEPKPGPKPI 343
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 486
P P + P P + P PEP+ P K P N P
Sbjct: 66 PHPKHESKPEPKPEPKPEPKPYPEPKPETKPELKPEPKPNPEPKP 110
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +1
Query: 346 LHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKG 495
L P+P + P P+ K P PEP+ P + P+ P G
Sbjct: 234 LKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPKPKPEPKPVPKPKPIPHPG 283
>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 31.9 bits (69), Expect = 0.32
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 229 ADLAGKAETLLNNLDEQTGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKI 408
AD KA LL+ E G+A N + ++EN+ L PS + K P+ L +
Sbjct: 1058 ADSRAKAPDLLSGDIESPGSANGNES-----QEENAGSSLDA-PSNDSEKSAPPKRLART 1111
Query: 409 SPVPEPR-----SNYTPARKISPIQNLNKSPV 489
P P S++TP R SP +N +PV
Sbjct: 1112 LSSPSPTKASSISSFTPRRMPSPSRNRPSTPV 1143
>07_03_0091 + 13312904-13313647
Length = 247
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPAR-KISPIQNLNKSPVKGN 498
P+PS N + P P+ + P PEP+ P++ K+ P+ V GN
Sbjct: 198 PEPSPNPKPNPNPKPEPQPDPKPEPKPQPEPSQPKLPPLSPAIAIIVPGN 247
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 486
P P Q +P P+ K SP P+P+ P K P N P
Sbjct: 84 PQPEPKQDPQPNPQPDPKQSPQPDPKPTPQPNPKQDPQPNPQPDP 128
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+PS N + P P + SP P+P N P + P
Sbjct: 182 PEPSPNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPDP 218
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 507
P P +P P+ + +P P+P+ + P K +P N + P + N +P
Sbjct: 76 PQPDPKPTPQPEPKQDPQPNPQPDPKQSPQPDPKPTPQPNPKQDP-QPNPQP 126
>05_03_0040 - 7646525-7647775
Length = 416
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 507
HP+P + +P P+ K P PEP+ P K P P K EP
Sbjct: 345 HPEPKPEPKPQPEPKPEPKPEPKPEPKPEPKPEPKPYPEPKPEPKP-KPKPEP 396
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
HP+P +P P+ K P PEP+ P K P
Sbjct: 197 HPEPEPKPEPKPEPKPEPKPEPKPEPKPKPKPEPKPKP 234
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
HP+P +P P+ + P PEP+ P K P
Sbjct: 181 HPEPEPKPEPKPEPKPHPEPEPKPEPKPEPKPEPKPEP 218
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+P +P+P K P PEP+ P K P
Sbjct: 72 PEPKPEPEPKPVPEPEPKPEPKPEPKPEPKPEPKPYP 108
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
+P+P +P P+ K P PEP+ P K P
Sbjct: 239 YPEPKPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEP 276
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+P + +P P+ K P PEP+ P K P
Sbjct: 270 PEPKPEPKPKPEPKPHPKPEPKPEPKPEPKPEPKPEP 306
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -1
Query: 341 KSEFSCLRAFTTL*LRRAAPVCSSKLLRSV--SAFPAKSANQAILIYFLKA 195
+ E + LRA+TTL L ++ + +++L S+ + PA N A ++ +L A
Sbjct: 274 QKEPTILRAYTTLCLSKSGTLHKNQILTSLKGAGLPANEDNAAAMLRYLNA 324
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -1
Query: 341 KSEFSCLRAFTTL*LRRAAPVCSSKLLRSV--SAFPAKSANQAILIYFLKA 195
+ E + LRA+TTL L ++ + +++L S+ + PA N A ++ +L A
Sbjct: 283 QKEPTILRAYTTLCLSKSGTLHKNQILTSLKGAGLPANEDNAAAMLRYLNA 333
>07_03_0089 - 13300902-13301645
Length = 247
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 486
P+P + P P +P PEP+ + P K P +L K P
Sbjct: 190 PEPKPEPKPEPSPNPKPNPNPKPEPQPDPKPEPKPQPEPSLPKPP 234
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 486
P P Q +P P+ K SP P+P+ P K P N P
Sbjct: 84 PQPEPKQDPKPNPQPDPKPSPQPDPKPTPQPDPKQDPQPNPQPDP 128
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
P+PS N + P P + SP P+P N P + P
Sbjct: 182 PEPSPNPKPEPKPEPKPEPSPNPKPNPNPKPEPQPDP 218
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP-VKGNQEPVRN 516
P P+ Q +P P+ K +P P+P+ + P + SP + +P K EP N
Sbjct: 132 PQPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPN 187
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 DPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP-VKGNQEPVRN 516
DP+ P P+ K SP P P+ N P K SP + +P + Q+P N
Sbjct: 41 DPNPKPDPTPKPQPETKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPKPN 95
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 349 HPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 507
+P P +P P+ + +P P+P+ P K P N SP K + +P
Sbjct: 123 NPQPDPKPTPQPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSP-KADPKP 174
>02_02_0379 +
9565001-9565515,9565553-9565833,9565884-9566084,
9566253-9566309,9566955-9567019,9567199-9567420
Length = 446
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEP 426
PDPSW + +P P L++ SP P P
Sbjct: 384 PDPSWERPLKPHP--LREPSPTPHP 406
>08_02_0079 + 12005624-12005921,12006144-12006550,12007250-12007840
Length = 431
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 160 RVKLRKIWKNFQAFKK*IKMAWFADLAGKAETLLNNLDEQTGAALRNHNV 309
R L KIW A+K I M+ + + GK+ LL L+ + A+RN N+
Sbjct: 88 RNHLPKIWYPQDAYKTPIGMSPYQIVYGKSCRLLVELEHRAYWAIRNWNM 137
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 376 KRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKS 483
KRP P+ L + P P+P + PA+ +P +L +S
Sbjct: 8 KRPPPQPLPRRPPPPKPSAESKPAKARAPATSLLES 43
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 316 ARKQENSDFILHPD-PSWNQRKRPIPRNLKKISPVPEPRSNYTPARK 453
A + + F L P PSW P + L P P S TP R+
Sbjct: 171 AASRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPRR 217
>09_06_0177 +
21365314-21366100,21367451-21367578,21367715-21367870,
21368006-21368196,21369392-21369434,21369537-21369627,
21369859-21369935,21370278-21370366,21370474-21370657,
21370885-21371138,21371465-21371567,21371646-21371977,
21372060-21372504
Length = 959
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/77 (19%), Positives = 31/77 (40%)
Frame = +1
Query: 94 KHTTVVIVMTVYVLHKLSLKTRRVKLRKIWKNFQAFKK*IKMAWFADLAGKAETLLNNLD 273
+ T +V + + +L + R WK+ F + + WF K ++
Sbjct: 488 QRTGIVDAVVAARILNATLVVPELDQRSFWKDSSNFSEIFDINWFISFLAKDVNIIKEPP 547
Query: 274 EQTGAALRNHNVVKARK 324
E+ G A++ + + RK
Sbjct: 548 EKGGKAVKPYKMRVPRK 564
>07_03_1102 - 23981362-23982219
Length = 285
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 319 RKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEP 426
R +S F HP PS R RP PR +P P P
Sbjct: 134 RSLSSSLFYAHPSPSPQLRTRP-PRRSTGSAPPPPP 168
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 382 PIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 507
P PR ++ SP P P T R+ +N +S +G +EP
Sbjct: 337 PAPRRGRRKSPSPSPPKAKTTRRRTK--KNTQESDSEGEEEP 376
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,997,711
Number of Sequences: 37544
Number of extensions: 270419
Number of successful extensions: 981
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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