Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307F06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 38 0.006
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 0.38
Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.66
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 30 1.2
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical p... 28 3.5
Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical p... 28 3.5
U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein. 28 3.5
U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein. 28 3.5
U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein. 28 3.5
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 28 3.5
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 28 3.5
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 28 4.7
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical pr... 27 8.1
CU457740-9|CAM36339.1| 357|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 217 MAWFA---DLAGKAETLLNNLDEQTGAALRNHNVVKARKQENS 336
M+W + D+AG AE LLN LDE+TG A++N R +++S
Sbjct: 1 MSWLSKVSDIAGAAENLLNKLDEKTGDAIQNARDSAPRTRKSS 43
>Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 217 MAWFA---DLAGKAETLLNNLDEQTGAALRNHNVVKARKQENS 336
M+W + D+AG AE LLN LDE+TG A++N R +++S
Sbjct: 1 MSWLSKVSDIAGAAENLLNKLDEKTGDAIQNARDSAPRTRKSS 43
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 310 VKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPA-RKISPIQNLNKSP 486
V+ +Q ++ P P Q RP P + PVP+P+ PA R ++P +L + P
Sbjct: 322 VRPNEQFQQPRVVRPQPQ-QQLTRPAPARPQTRRPVPQPQQATRPAPRPVAPKSHLAQQP 380
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 283 GAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
G L+N +K++ + P P + +P P+ K P P+P+ N P K P
Sbjct: 148 GGVLKNEPKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP 207
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 486
P P+ +P P+ K P PEP+ P K P N N P
Sbjct: 195 PKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKP 239
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEP 507
P P + +P P+ K P PEP+ P K P P K N P
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKP-KPNPNP 237
>Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical
protein ZK1058.9 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 364 WNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPV 510
W++ P+ + S V R +YTP R+IS + N+N + ++ P+
Sbjct: 109 WSRENTPVDNEKRYASHV---RRSYTPVREISAVNNVNDGNLHRSRTPL 154
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +1
Query: 307 VVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
+++ + + +S + +PS + K P P+ K P P+P+ + PA+ +SP
Sbjct: 661 IMRKKSKPSSSEVPPAEPSAPEPK-PAPKPDPKPDPKPDPKPDPVPAKPVSP 711
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 270 RRANRSSPTQSQCCEGT*TRKLRFYLTSRPFLEPKKKANTTKFKENFTRSRATFK 434
RR+ S+ G R+L FY S+ + KKK +K FT +R TFK
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQKKKEELSKVDTKFTITR-TFK 324
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 270 RRANRSSPTQSQCCEGT*TRKLRFYLTSRPFLEPKKKANTTKFKENFTRSRATFK 434
RR+ S+ G R+L FY S+ + KKK +K FT +R TFK
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQKKKEELSKVDTKFTITR-TFK 324
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 382 PIPRNLKKISPVPE-PRSNYTPARKISPIQNLNKSPVKGNQEPVR 513
P P+ K S P PR +P++ SP +SP K Q P R
Sbjct: 422 PAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRR 466
>Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical
protein C01G10.11a protein.
Length = 378
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 232 DLAGKAETLLNNLDEQTGAALRNHNVVKA 318
+ +G E L+ N DE+ A L++H V A
Sbjct: 50 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 78
>Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical
protein C01G10.11b protein.
Length = 369
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 232 DLAGKAETLLNNLDEQTGAALRNHNVVKA 318
+ +G E L+ N DE+ A L++H V A
Sbjct: 50 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 78
>U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein.
Length = 376
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 232 DLAGKAETLLNNLDEQTGAALRNHNVVKA 318
+ +G E L+ N DE+ A L++H V A
Sbjct: 57 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 85
>U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein.
Length = 379
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 232 DLAGKAETLLNNLDEQTGAALRNHNVVKA 318
+ +G E L+ N DE+ A L++H V A
Sbjct: 51 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 79
>U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein.
Length = 385
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 232 DLAGKAETLLNNLDEQTGAALRNHNVVKA 318
+ +G E L+ N DE+ A L++H V A
Sbjct: 57 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 85
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 277 QTGAALRNHNVVKAR--KQENSDFILHPDPSWNQRKRPIP 390
+ G+ LR +AR + ++ D HP PS RK P+P
Sbjct: 98 ENGSCLRRRKRFRARGGQDDDDDDFHHPAPSKISRKNPLP 137
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 277 QTGAALRNHNVVKAR--KQENSDFILHPDPSWNQRKRPIP 390
+ G+ LR +AR + ++ D HP PS RK P+P
Sbjct: 98 ENGSCLRRRKRFRARGGQDDDDDDFHHPAPSKISRKNPLP 137
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +1
Query: 211 IKMAWFADLAGKAETLLNNLDEQTGAALRNHNVVKARK----QENSDFILHPDPSWNQRK 378
+K +W +L K T ++D++ G + + + +S IL P P +Q+K
Sbjct: 1089 VKQSW-DNLMKKKPTASPSIDKEDGEWASDDESRERKNLPSTSSSSVIILSPPPHPSQKK 1147
Query: 379 RPIPRNLKKISPVPEPRSNYT-PARKISPIQNLNKSPVKGNQEP 507
P IS + P +NY+ P++ P Q N P +Q P
Sbjct: 1148 IQPPVAPPGISNLNRPGNNYSGPSQSFRPNQQYN--PNFNHQRP 1189
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +1
Query: 211 IKMAWFADLAGKAETLLNNLDEQTGAALRNHNVVKARK----QENSDFILHPDPSWNQRK 378
+K +W +L K T ++D++ G + + + +S IL P P +Q+K
Sbjct: 1089 VKQSW-DNLMKKKPTASPSIDKEDGEWASDDESRERKNLPSTSSSSVIILSPPPHPSQKK 1147
Query: 379 RPIPRNLKKISPVPEPRSNYT-PARKISPIQNLNKSPVKGNQEP 507
P IS + P +NY+ P++ P Q N P +Q P
Sbjct: 1148 IQPPVAPPGISNLNRPGNNYSGPSQSFRPNQQYN--PNFNHQRP 1189
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 280 TGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPAR-KI 456
TG +L++ + + P PS N K +N+ K +P+ N P R +I
Sbjct: 59 TGNSLKSSASSTQSTEAKPPPVQFPPPSKNPPKHVHQQNVSKSPLIPQLPRNQVPTRPQI 118
Query: 457 SPIQNLNKSP 486
+ +Q++ + P
Sbjct: 119 NTVQSVQQKP 128
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 367 NQRKRPIPRNLKKISPVPEP-RSNYTPARKISPIQNLNKSPV 489
N++ R R+ KK+ P P R + +P+ K SP ++ + SP+
Sbjct: 264 NRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPRRSRSASPM 305
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 489
P P + PIP+ + P+P+P+ P K P L P+
Sbjct: 230 PKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPM 275
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 343 ILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 462
+L P P + P P+ + K P P+P P K+ P
Sbjct: 233 MLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKP 272
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 352 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 489
P P + +P+P+ K+ P+P P K+ P K+PV
Sbjct: 250 PMPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKPKLKPKTKPKKNPV 295
>Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical
protein C25F9.4 protein.
Length = 592
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 358 PSWNQRKRPIPRNLKKISPVPEPRSNYTPARKIS 459
PSW + + +P KK+ VPE S + IS
Sbjct: 69 PSWTNKLQKLPSKCKKVPEVPEECSENSKNDDIS 102
>CU457740-9|CAM36339.1| 357|Caenorhabditis elegans Hypothetical
protein C50E10.9 protein.
Length = 357
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 397 LKKISPVPEPRSNYTPARKISPIQNL 474
+KKIS R NYT AR+ ++NL
Sbjct: 219 IKKISDKNSKRENYTLARRFQTMENL 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,982,920
Number of Sequences: 27780
Number of extensions: 257859
Number of successful extensions: 860
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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